Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.32□□□□□ -2.04
C11orf88Q6PI97 AP000763.2-201ENST00000540641 163 ntBASIC2.32□□□□□ -2.04
C11orf88Q6PI97 GTF3AP2-201ENST00000557014 266 ntBASIC2.32□□□□□ -2.04
C11orf88Q6PI97 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.32□□□□□ -2.04
C11orf88Q6PI97 MIR4703-201ENST00000577728 79 ntBASIC2.32□□□□□ -2.04
C11orf88Q6PI97 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.32□□□□□ -2.04
C11orf88Q6PI97 AC026271.5-201ENST00000577873 130 ntBASIC2.32□□□□□ -2.04
C11orf88Q6PI97 MIR4529-201ENST00000578110 78 ntBASIC2.32□□□□□ -2.04
C11orf88Q6PI97 LRRC37A5P-203ENST00000580181 585 ntBASIC2.32□□□□□ -2.04
C11orf88Q6PI97 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.32□□□□□ -2.04
C11orf88Q6PI97 AC078795.2-201ENST00000602835 1252 ntBASIC2.32□□□□□ -2.04
C11orf88Q6PI97 AC063943.3-201ENST00000615562 356 ntBASIC2.32□□□□□ -2.04
C11orf88Q6PI97 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
C11orf88Q6PI97 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
C11orf88Q6PI97 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
C11orf88Q6PI97 RNU6-393P-201ENST00000384475 107 ntBASIC2.31□□□□□ -2.04
C11orf88Q6PI97 SNORD70.1-201ENST00000391007 85 ntBASIC2.31□□□□□ -2.04
C11orf88Q6PI97 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.31□□□□□ -2.04
C11orf88Q6PI97 AC087499.2-201ENST00000432861 149 ntBASIC2.31□□□□□ -2.04
C11orf88Q6PI97 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.31□□□□□ -2.04
C11orf88Q6PI97 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.31□□□□□ -2.04
C11orf88Q6PI97 AC018868.1-201ENST00000491307 315 ntBASIC2.31□□□□□ -2.04
C11orf88Q6PI97 RNA5SP356-201ENST00000515972 94 ntBASIC2.31□□□□□ -2.04
C11orf88Q6PI97 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.31□□□□□ -2.04
C11orf88Q6PI97 AP003072.2-201ENST00000527756 676 ntBASIC2.31□□□□□ -2.04
C11orf88Q6PI97 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.31□□□□□ -2.04
C11orf88Q6PI97 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.31□□□□□ -2.04
C11orf88Q6PI97 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.31□□□□□ -2.04
C11orf88Q6PI97 AC233702.2-202ENST00000562547 291 ntBASIC2.31□□□□□ -2.04
C11orf88Q6PI97 MIR4287-201ENST00000579398 78 ntBASIC2.31□□□□□ -2.04
C11orf88Q6PI97 MIR5092-201ENST00000583139 88 ntBASIC2.31□□□□□ -2.04
C11orf88Q6PI97 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.31□□□□□ -2.04
C11orf88Q6PI97 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
C11orf88Q6PI97 ELL2P3-201ENST00000457883 1602 ntBASIC2.31□□□□□ -2.04
C11orf88Q6PI97 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.31□□□□□ -2.04
C11orf88Q6PI97 AC002543.1-201ENST00000299783 1954 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 RNA5SP276-201ENST00000362580 94 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 RNU6-546P-201ENST00000383991 107 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 SNORD116-8-201ENST00000384365 95 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 MIR17-201ENST00000385012 84 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 MIR9-1-201ENST00000385198 89 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AL669831.1-202ENST00000428504 417 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 MTATP6P17-201ENST00000431030 672 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AC098826.1-201ENST00000433943 471 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 GTF2IP13-201ENST00000438487 386 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 RPS12P2-201ENST00000439728 269 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 PRPS1P1-201ENST00000445305 876 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AL118520.1-201ENST00000450770 291 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AC055731.1-201ENST00000474387 401 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 RPS29P26-201ENST00000477483 171 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AC092436.1-201ENST00000506450 503 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 MTND2P33-201ENST00000506452 1031 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 MTCYBP40-201ENST00000509390 1135 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 MIR4528-201ENST00000577763 90 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AC025449.1-201ENST00000603896 529 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AC107304.1-201ENST00000604229 296 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AP003400.5-201ENST00000624827 617 ntBASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.3□□□□□ -2.04
C11orf88Q6PI97 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
C11orf88Q6PI97 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.29□□□□□ -2.04
C11orf88Q6PI97 MTND4P14-201ENST00000435799 1354 ntBASIC2.29□□□□□ -2.04
C11orf88Q6PI97 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.29□□□□□ -2.04
C11orf88Q6PI97 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
C11orf88Q6PI97 CBX3P9-201ENST00000402326 552 ntBASIC2.29□□□□□ -2.04
C11orf88Q6PI97 BTF3P7-201ENST00000407097 488 ntBASIC2.29□□□□□ -2.04
C11orf88Q6PI97 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.29□□□□□ -2.04
C11orf88Q6PI97 AL590556.1-201ENST00000423231 483 ntBASIC2.29□□□□□ -2.04
C11orf88Q6PI97 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
C11orf88Q6PI97 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.29□□□□□ -2.04
C11orf88Q6PI97 AL031667.1-201ENST00000440222 725 ntBASIC2.29□□□□□ -2.04
C11orf88Q6PI97 AL135938.1-201ENST00000443141 297 ntBASIC2.29□□□□□ -2.04
C11orf88Q6PI97 AL137159.1-201ENST00000452808 512 ntBASIC2.29□□□□□ -2.04
C11orf88Q6PI97 AL353752.1-201ENST00000454946 260 ntBASIC2.29□□□□□ -2.04
C11orf88Q6PI97 HMGB1P35-201ENST00000503360 598 ntBASIC2.29□□□□□ -2.04
C11orf88Q6PI97 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.29□□□□□ -2.04
C11orf88Q6PI97 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.29□□□□□ -2.04
C11orf88Q6PI97 HIGD1AP13-201ENST00000509878 289 ntBASIC2.29□□□□□ -2.04
C11orf88Q6PI97 AC010493.1-201ENST00000513479 292 ntBASIC2.29□□□□□ -2.04
C11orf88Q6PI97 RNU2-19P-201ENST00000517288 84 ntBASIC2.29□□□□□ -2.04
C11orf88Q6PI97 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.29□□□□□ -2.04
C11orf88Q6PI97 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
C11orf88Q6PI97 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.29□□□□□ -2.04
C11orf88Q6PI97 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.29□□□□□ -2.04
C11orf88Q6PI97 AL158211.1-201ENST00000566763 763 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms