Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 NBR2-204ENST00000587322 63 ntBASIC2.4□□□□□ -2.03
CASC4Q6P4E1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.4□□□□□ -2.03
CASC4Q6P4E1 AC096772.1-201ENST00000609146 564 ntBASIC2.4□□□□□ -2.03
CASC4Q6P4E1 AC245884.12-201ENST00000615364 59 ntBASIC2.4□□□□□ -2.03
CASC4Q6P4E1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CASC4Q6P4E1 HAUS6P2-201ENST00000433254 2404 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 OR56A5-201ENST00000340110 738 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 RNU6-78P-201ENST00000362897 107 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 SNORD114-19-201ENST00000363072 75 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 Y_RNA.296-201ENST00000364930 108 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CASC4Q6P4E1 RNU5A-6P-201ENST00000384136 116 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 RNU6-622P-201ENST00000384272 103 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 RNU6-1127P-201ENST00000384580 107 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 AL591416.1-201ENST00000404015 867 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 AL353193.1-201ENST00000421444 268 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 AC002486.1-201ENST00000435098 391 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.39□□□□□ -2.03
CASC4Q6P4E1 AC012308.1-201ENST00000451232 178 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.39□□□□□ -2.03
CASC4Q6P4E1 HMGB1P29-201ENST00000505659 499 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
CASC4Q6P4E1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.39□□□□□ -2.03
CASC4Q6P4E1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.39□□□□□ -2.03
CASC4Q6P4E1 RPL7P20-201ENST00000520308 745 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.39□□□□□ -2.03
CASC4Q6P4E1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.39□□□□□ -2.03
CASC4Q6P4E1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.39□□□□□ -2.03
CASC4Q6P4E1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.39□□□□□ -2.03
CASC4Q6P4E1 AC105137.2-201ENST00000569073 466 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 AL138963.2-201ENST00000605137 226 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 AP001596.2-201ENST00000608410 312 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 AC007684.1-201ENST00000609671 477 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.39□□□□□ -2.03
CASC4Q6P4E1 MIR1291-201ENST00000627649 87 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 MIR203B-201ENST00000636080 86 ntBASIC2.39□□□□□ -2.03
CASC4Q6P4E1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CASC4Q6P4E1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.39□□□□□ -2.03
CASC4Q6P4E1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CASC4Q6P4E1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CASC4Q6P4E1 RNA5SP68-201ENST00000363885 119 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 SNORA38-201ENST00000363946 132 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CASC4Q6P4E1 RNU6-393P-201ENST00000384475 107 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 Y_RNA.510-201ENST00000384511 114 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 SNORA16.2-201ENST00000390991 127 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 SNORD70.1-201ENST00000391007 85 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 RNU2-29P-201ENST00000410423 189 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AC074117.2-201ENST00000417130 397 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AC138623.1-201ENST00000418060 216 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AL365400.1-201ENST00000431854 640 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.38□□□□□ -2.03
CASC4Q6P4E1 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AC108938.1-201ENST00000451204 136 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 MTCO2P18-201ENST00000457151 658 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 RNU7-63P-201ENST00000459054 62 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 GMFBP1-201ENST00000467831 427 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AF213884.2-201ENST00000510417 903 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AC105417.1-201ENST00000514691 285 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 RNU2-69P-201ENST00000516061 100 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AC087241.2-201ENST00000535801 324 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AL133241.1-201ENST00000556832 487 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AC009063.1-201ENST00000563342 702 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AC078795.2-201ENST00000602835 1252 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 Z69720.2-201ENST00000624755 279 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AC005609.4-201ENST00000625071 447 ntBASIC2.38□□□□□ -2.03
CASC4Q6P4E1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.38□□□□□ -2.03
CASC4Q6P4E1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
CASC4Q6P4E1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CASC4Q6P4E1 Y_RNA.1-201ENST00000352915 104 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 RNU6-1010P-201ENST00000362757 107 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 RNU6-552P-201ENST00000362869 119 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 Y_RNA.324-201ENST00000365165 102 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 RNU6-903P-201ENST00000391270 109 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.37□□□□□ -2.03
CASC4Q6P4E1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.37□□□□□ -2.03
CASC4Q6P4E1 MTCYBP8-201ENST00000422855 651 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 AC008267.5-201ENST00000424928 265 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CASC4Q6P4E1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.37□□□□□ -2.03
CASC4Q6P4E1 CR769767.1-201ENST00000436337 346 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 AC006026.2-201ENST00000457376 180 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 SCARNA18-201ENST00000459004 134 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 MTCO3P7-201ENST00000510008 774 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.37□□□□□ -2.03
CASC4Q6P4E1 LRRC34P2-201ENST00000514850 553 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 SNORA31.11-201ENST00000516528 139 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 RNU6-405P-201ENST00000516637 110 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 IGLV3-17-201ENST00000519099 244 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 AP005902.1-201ENST00000521358 186 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 AC121758.2-201ENST00000553271 193 ntBASIC2.37□□□□□ -2.03
CASC4Q6P4E1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.37□□□□□ -2.03
CASC4Q6P4E1 AC009127.3-201ENST00000570531 403 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms