Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 RNU6-703P-201ENST00000516946 107 ntBASIC2.14□□□□□ -2.07
ZNF544Q6NX49 MTND4LP26-201ENST00000518144 282 ntBASIC2.14□□□□□ -2.07
ZNF544Q6NX49 AC009902.1-201ENST00000519351 183 ntBASIC2.14□□□□□ -2.07
ZNF544Q6NX49 AC109329.2-201ENST00000519658 482 ntBASIC2.14□□□□□ -2.07
ZNF544Q6NX49 MTCO3P23-201ENST00000561363 289 ntBASIC2.14□□□□□ -2.07
ZNF544Q6NX49 AL138976.2-201ENST00000563989 694 ntBASIC2.14□□□□□ -2.07
ZNF544Q6NX49 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.14□□□□□ -2.07
ZNF544Q6NX49 AC009127.3-201ENST00000570531 403 ntBASIC2.14□□□□□ -2.07
ZNF544Q6NX49 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ZNF544Q6NX49 MIR1273C-201ENST00000578669 77 ntBASIC2.14□□□□□ -2.07
ZNF544Q6NX49 MIR3945-201ENST00000581853 98 ntBASIC2.14□□□□□ -2.07
ZNF544Q6NX49 MIR4424-201ENST00000585257 86 ntBASIC2.14□□□□□ -2.07
ZNF544Q6NX49 AL162413.1-201ENST00000603198 110 ntBASIC2.14□□□□□ -2.07
ZNF544Q6NX49 AC004805.2-201ENST00000605382 482 ntBASIC2.14□□□□□ -2.07
ZNF544Q6NX49 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.14□□□□□ -2.07
ZNF544Q6NX49 U6atac.1-201ENST00000616025 117 ntBASIC2.14□□□□□ -2.07
ZNF544Q6NX49 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.14□□□□□ -2.07
ZNF544Q6NX49 FER-210ENST00000628534 558 ntTSL 5 BASIC2.14□□□□□ -2.07
ZNF544Q6NX49 MIR3688-2-201ENST00000636963 87 ntBASIC2.14□□□□□ -2.07
ZNF544Q6NX49 HSPA8P4-201ENST00000511877 1920 ntBASIC2.14□□□□□ -2.07
ZNF544Q6NX49 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ZNF544Q6NX49 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
ZNF544Q6NX49 RNU6-778P-201ENST00000363269 103 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 RNU6-371P-201ENST00000364283 108 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 SNORA69-201ENST00000383895 132 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 RNU6-483P-201ENST00000384088 108 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 CISD1P1-201ENST00000393907 327 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AL591416.1-201ENST00000404015 867 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 RNU2-68P-201ENST00000410878 191 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 SNRPEP10-201ENST00000420249 274 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AC099548.1-201ENST00000421443 426 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.13□□□□□ -2.07
ZNF544Q6NX49 BRK1P2-201ENST00000442875 223 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.13□□□□□ -2.07
ZNF544Q6NX49 MTATP6P7-201ENST00000453315 681 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.13□□□□□ -2.07
ZNF544Q6NX49 RNU7-180P-201ENST00000459240 63 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AC006512.1-201ENST00000468816 291 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 RPS29P25-201ENST00000481709 171 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 RNU6-928P-201ENST00000516876 104 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 RNU6-143P-201ENST00000516942 93 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 RNA5SP165-201ENST00000517142 115 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 COX6CP5-201ENST00000527162 228 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 GLYCAM1-201ENST00000546596 285 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AC091544.4-201ENST00000555268 342 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AL157871.3-201ENST00000557231 293 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 RPS3AP23-202ENST00000574601 686 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AC067747.1-201ENST00000608026 250 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 MIR6840-201ENST00000611937 71 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AL354950.2-201ENST00000617939 290 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AC026585.1-201ENST00000619582 524 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AC064859.1-201ENST00000624741 174 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AL512643.1-201ENST00000635735 524 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AP000553.5-201ENST00000641933 54 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 AL354685.2-201ENST00000448218 1447 ntBASIC2.13□□□□□ -2.07
ZNF544Q6NX49 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
ZNF544Q6NX49 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ZNF544Q6NX49 MIR21-201ENST00000362134 72 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 RNU6-1287P-201ENST00000362914 107 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 RNU1-105P-201ENST00000363470 161 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 RNU6-395P-201ENST00000365662 106 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 Y_RNA.381-201ENST00000365666 102 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 RNU6-1060P-201ENST00000384664 107 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ZNF544Q6NX49 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.12□□□□□ -2.07
ZNF544Q6NX49 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.12□□□□□ -2.07
ZNF544Q6NX49 RPL26P27-201ENST00000414397 437 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.12□□□□□ -2.07
ZNF544Q6NX49 AL135786.1-201ENST00000415892 214 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.12□□□□□ -2.07
ZNF544Q6NX49 MTCYBP8-201ENST00000422855 651 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 MTCO1P20-201ENST00000425366 358 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 SKA2P1-201ENST00000425592 390 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.12□□□□□ -2.07
ZNF544Q6NX49 SRIP2-201ENST00000428470 166 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.12□□□□□ -2.07
ZNF544Q6NX49 RPL36AP53-201ENST00000432891 316 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ZNF544Q6NX49 SEPT14P3-201ENST00000439401 183 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 AL732372.2-207ENST00000445840 183 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.12□□□□□ -2.07
ZNF544Q6NX49 SEPT14P2-201ENST00000453405 183 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 MTCO3P9-201ENST00000506989 781 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 AC008413.1-201ENST00000511864 177 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 SEPT14P4-201ENST00000513445 186 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 RNU6-1281P-201ENST00000516223 105 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 Y_RNA.704-201ENST00000516851 102 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.12□□□□□ -2.07
ZNF544Q6NX49 FO082796.1-201ENST00000523795 183 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.12□□□□□ -2.07
ZNF544Q6NX49 HIF1AP1-201ENST00000553642 175 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 AC027176.1-201ENST00000560204 514 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 SNORD53-201ENST00000579969 78 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 AL356280.1-201ENST00000603614 379 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms