Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF20Q5VTR2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF20Q5VTR2 MIR4308-201ENST00000580634 81 ntBASIC4.99□□□□□ -1.61
RNF20Q5VTR2 AC005828.6-201ENST00000606610 232 ntBASIC4.99□□□□□ -1.61
RNF20Q5VTR2 MIR6820-201ENST00000611508 62 ntBASIC4.99□□□□□ -1.61
RNF20Q5VTR2 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF20Q5VTR2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RNF20Q5VTR2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF20Q5VTR2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF20Q5VTR2 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF20Q5VTR2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF20Q5VTR2 Y_RNA.319-201ENST00000365138 92 ntBASIC4.98□□□□□ -1.61
RNF20Q5VTR2 RNA5SP366-201ENST00000365454 123 ntBASIC4.98□□□□□ -1.61
RNF20Q5VTR2 RNU6-898P-201ENST00000365627 104 ntBASIC4.98□□□□□ -1.61
RNF20Q5VTR2 Z98749.2-208ENST00000381646 500 ntBASIC4.98□□□□□ -1.61
RNF20Q5VTR2 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RNF20Q5VTR2 RNU6-281P-201ENST00000384212 103 ntBASIC4.98□□□□□ -1.61
RNF20Q5VTR2 MIR325-201ENST00000385260 98 ntBASIC4.98□□□□□ -1.61
RNF20Q5VTR2 RNU6-1245P-201ENST00000411130 106 ntBASIC4.98□□□□□ -1.61
RNF20Q5VTR2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF20Q5VTR2 RPS26P15-201ENST00000488067 348 ntBASIC4.98□□□□□ -1.61
RNF20Q5VTR2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF20Q5VTR2 RNU6-1183P-201ENST00000517054 60 ntBASIC4.98□□□□□ -1.61
RNF20Q5VTR2 AP004607.1-201ENST00000524456 203 ntBASIC4.98□□□□□ -1.61
RNF20Q5VTR2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF20Q5VTR2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF20Q5VTR2 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.98□□□□□ -1.61
RNF20Q5VTR2 AC022893.2-201ENST00000564832 3296 ntBASIC4.98□□□□□ -1.61
RNF20Q5VTR2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF20Q5VTR2 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF20Q5VTR2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.98□□□□□ -1.61
RNF20Q5VTR2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF20Q5VTR2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 Y_RNA.331-201ENST00000365267 102 ntBASIC4.97□□□□□ -1.61
RNF20Q5VTR2 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 RNU6-658P-201ENST00000384606 106 ntBASIC4.97□□□□□ -1.61
RNF20Q5VTR2 U3.22-201ENST00000391120 215 ntBASIC4.97□□□□□ -1.61
RNF20Q5VTR2 AC024067.1-201ENST00000426199 223 ntBASIC4.97□□□□□ -1.61
RNF20Q5VTR2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 RNA5SP246-201ENST00000458909 119 ntBASIC4.97□□□□□ -1.61
RNF20Q5VTR2 AC109327.1-201ENST00000471666 403 ntBASIC4.97□□□□□ -1.61
RNF20Q5VTR2 AL132838.2-201ENST00000492041 314 ntBASIC4.97□□□□□ -1.61
RNF20Q5VTR2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 AL391261.3-201ENST00000557194 520 ntBASIC4.97□□□□□ -1.61
RNF20Q5VTR2 LINC00933-203ENST00000559812 219 ntBASIC4.97□□□□□ -1.61
RNF20Q5VTR2 MIR4277-201ENST00000578298 84 ntBASIC4.97□□□□□ -1.61
RNF20Q5VTR2 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 AC073349.3-201ENST00000617616 186 ntBASIC4.97□□□□□ -1.61
RNF20Q5VTR2 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.97□□□□□ -1.61
RNF20Q5VTR2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.97□□□□□ -1.61
RNF20Q5VTR2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF20Q5VTR2 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
RNF20Q5VTR2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF20Q5VTR2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF20Q5VTR2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RNF20Q5VTR2 RBBP8P1-201ENST00000449447 1844 ntBASIC4.96□□□□□ -1.62
RNF20Q5VTR2 SNORD50B-201ENST00000364995 70 ntBASIC4.96□□□□□ -1.62
RNF20Q5VTR2 RNU1-140P-201ENST00000365040 165 ntBASIC4.96□□□□□ -1.62
RNF20Q5VTR2 RPL23AP36-201ENST00000413895 458 ntBASIC4.96□□□□□ -1.62
RNF20Q5VTR2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF20Q5VTR2 AC009237.8-201ENST00000445492 379 ntBASIC4.96□□□□□ -1.62
RNF20Q5VTR2 AC006026.2-201ENST00000457376 180 ntBASIC4.96□□□□□ -1.62
RNF20Q5VTR2 RN7SL459P-201ENST00000481078 302 ntBASIC4.96□□□□□ -1.62
RNF20Q5VTR2 AC099522.1-202ENST00000514718 367 ntBASIC4.96□□□□□ -1.62
RNF20Q5VTR2 AC074133.1-201ENST00000515696 183 ntBASIC4.96□□□□□ -1.62
RNF20Q5VTR2 SNORA31.8-201ENST00000516327 108 ntBASIC4.96□□□□□ -1.62
RNF20Q5VTR2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.96□□□□□ -1.62
RNF20Q5VTR2 AC022655.2-201ENST00000577280 318 ntBASIC4.96□□□□□ -1.62
RNF20Q5VTR2 AL590392.1-201ENST00000604960 446 ntBASIC4.96□□□□□ -1.62
RNF20Q5VTR2 AC084757.4-201ENST00000616350 526 ntBASIC4.96□□□□□ -1.62
RNF20Q5VTR2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF20Q5VTR2 Z82217.1-201ENST00000625157 8149 ntBASIC4.96□□□□□ -1.62
RNF20Q5VTR2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF20Q5VTR2 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
RNF20Q5VTR2 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF20Q5VTR2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF20Q5VTR2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF20Q5VTR2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RNF20Q5VTR2 Z73965.1-201ENST00000623412 2297 ntBASIC4.95□□□□□ -1.62
RNF20Q5VTR2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF20Q5VTR2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
RNF20Q5VTR2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF20Q5VTR2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF20Q5VTR2 U8.10-201ENST00000384260 133 ntBASIC4.95□□□□□ -1.62
RNF20Q5VTR2 RNU6-1117P-201ENST00000384525 104 ntBASIC4.95□□□□□ -1.62
RNF20Q5VTR2 RNU6-140P-201ENST00000384566 108 ntBASIC4.95□□□□□ -1.62
RNF20Q5VTR2 MIR329-1-201ENST00000385028 80 ntBASIC4.95□□□□□ -1.62
RNF20Q5VTR2 SNORA46.1-201ENST00000391069 153 ntBASIC4.95□□□□□ -1.62
RNF20Q5VTR2 AL390729.2-201ENST00000416137 156 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms