Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 SYF2P2-201ENST00000417620 583 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 AC138623.1-201ENST00000418060 216 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 RPL27AP5-201ENST00000469428 449 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 RPL36AP48-201ENST00000485521 314 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 SNORA31.6-201ENST00000516241 130 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 RNU6-1016P-201ENST00000516689 94 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 AC107934.2-201ENST00000518653 310 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 AL355375.2-201ENST00000574825 175 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 AP001836.1-201ENST00000604675 523 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 AL356157.2-201ENST00000605122 111 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 AC019176.2-201ENST00000611579 315 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 FAM35CP-201ENST00000554755 2470 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
RNF220Q5VTB9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
RNF220Q5VTB9 RNU6-227P-201ENST00000362865 103 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 SNORD114-19-201ENST00000363072 75 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 RNU1-140P-201ENST00000365040 165 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 RNU6-306P-201ENST00000384617 107 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 MIR521-1-201ENST00000384902 87 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 SNORA57.1-201ENST00000391227 145 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 RNU4-14P-201ENST00000410858 122 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 Z99755.1-201ENST00000414048 380 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 AL035423.1-201ENST00000420331 213 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.21□□□□□ -1.9
RNF220Q5VTB9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.21□□□□□ -1.9
RNF220Q5VTB9 AC006946.1-201ENST00000429106 328 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.21□□□□□ -1.9
RNF220Q5VTB9 AC009296.1-201ENST00000443146 155 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 RPL23AP67-201ENST00000465341 474 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 AC006445.1-201ENST00000491925 405 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 RPL22P13-201ENST00000493291 347 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 PTP4A1P4-201ENST00000512479 322 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 ACA59.1-201ENST00000515966 143 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 RN7SKP18-201ENST00000516005 275 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 SNORA70.18-201ENST00000516696 98 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.21□□□□□ -1.9
RNF220Q5VTB9 AC009812.2-201ENST00000517657 457 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.21□□□□□ -1.9
RNF220Q5VTB9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.21□□□□□ -1.9
RNF220Q5VTB9 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.21□□□□□ -1.9
RNF220Q5VTB9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.21□□□□□ -1.9
RNF220Q5VTB9 MIR7851-201ENST00000610611 160 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 MIR8076-201ENST00000611401 83 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 AC007792.1-201ENST00000623023 402 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 AL359697.1-201ENST00000624879 587 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 MTND5P30-201ENST00000452896 1731 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.21□□□□□ -1.9
RNF220Q5VTB9 AL359854.1-201ENST00000614203 1594 ntBASIC3.21□□□□□ -1.9
RNF220Q5VTB9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF220Q5VTB9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF220Q5VTB9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF220Q5VTB9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.2□□□□□ -1.9
RNF220Q5VTB9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RNF220Q5VTB9 RNU6-1222P-201ENST00000384615 107 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 BTF3L4P2-201ENST00000392798 346 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 RN7SKP111-201ENST00000410349 271 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 RN7SKP58-201ENST00000411010 305 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 RNA5SP344-201ENST00000411081 104 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.2□□□□□ -1.9
RNF220Q5VTB9 MTND3P9-201ENST00000429526 346 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 Z98742.2-201ENST00000431564 187 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.2□□□□□ -1.9
RNF220Q5VTB9 RPL23AP58-201ENST00000440453 469 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 RPL39P29-201ENST00000447779 157 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.2□□□□□ -1.9
RNF220Q5VTB9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RNF220Q5VTB9 SNORD5.1-201ENST00000458800 75 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 AC008571.1-201ENST00000467232 300 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 AC008549.1-201ENST00000512900 643 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 RNU6-559P-201ENST00000516151 98 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 Y_RNA.675-201ENST00000516389 149 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 AC109329.1-201ENST00000518744 317 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 MIR4795-201ENST00000584182 89 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 MIR4765-201ENST00000585007 77 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.2□□□□□ -1.9
RNF220Q5VTB9 AC010620.2-201ENST00000600135 313 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 AC018462.2-201ENST00000605375 395 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 MIR3976-201ENST00000606807 139 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 MIR7515-201ENST00000637837 67 ntBASIC3.2□□□□□ -1.9
RNF220Q5VTB9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms