Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC093788.1-201ENST00000609356 927 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 uc_338.15-201ENST00000615470 191 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.45□□□□□ -2.34
CCDC58Q4VC31 RNU6-529P-201ENST00000363383 104 ntBASIC0.44□□□□□ -2.34
CCDC58Q4VC31 MIR10B-201ENST00000385011 110 ntBASIC0.44□□□□□ -2.34
CCDC58Q4VC31 DHFRP6-201ENST00000401776 268 ntBASIC0.44□□□□□ -2.34
CCDC58Q4VC31 AL139397.2-201ENST00000404529 772 ntBASIC0.44□□□□□ -2.34
CCDC58Q4VC31 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC58Q4VC31 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC58Q4VC31 CBX3P6-201ENST00000430257 527 ntBASIC0.44□□□□□ -2.34
CCDC58Q4VC31 SNRPEP7-201ENST00000438350 220 ntBASIC0.44□□□□□ -2.34
CCDC58Q4VC31 GTF2IP13-201ENST00000438487 386 ntBASIC0.44□□□□□ -2.34
CCDC58Q4VC31 Z73417.1-201ENST00000447373 778 ntBASIC0.44□□□□□ -2.34
CCDC58Q4VC31 RPL39P6-201ENST00000448289 150 ntBASIC0.44□□□□□ -2.34
CCDC58Q4VC31 AC108059.3-201ENST00000456388 214 ntBASIC0.44□□□□□ -2.34
CCDC58Q4VC31 AC091860.1-201ENST00000505723 432 ntBASIC0.44□□□□□ -2.34
CCDC58Q4VC31 AC034244.1-201ENST00000507687 207 ntBASIC0.44□□□□□ -2.34
CCDC58Q4VC31 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC58Q4VC31 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.44□□□□□ -2.34
CCDC58Q4VC31 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC58Q4VC31 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC58Q4VC31 MIR605-201ENST00000385078 83 ntBASIC0.43□□□□□ -2.34
CCDC58Q4VC31 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CCDC58Q4VC31 MTCO2P5-201ENST00000422621 426 ntBASIC0.43□□□□□ -2.34
CCDC58Q4VC31 MTND4P24-201ENST00000424002 397 ntBASIC0.43□□□□□ -2.34
CCDC58Q4VC31 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CCDC58Q4VC31 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.43□□□□□ -2.34
CCDC58Q4VC31 AC234064.1-201ENST00000436312 247 ntBASIC0.43□□□□□ -2.34
CCDC58Q4VC31 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC58Q4VC31 MTND1P9-201ENST00000453775 944 ntBASIC0.43□□□□□ -2.34
CCDC58Q4VC31 SNORD124-201ENST00000459577 104 ntBASIC0.43□□□□□ -2.34
CCDC58Q4VC31 RPL30P6-201ENST00000475925 342 ntBASIC0.43□□□□□ -2.34
CCDC58Q4VC31 SNORA70.22-201ENST00000517160 124 ntBASIC0.43□□□□□ -2.34
CCDC58Q4VC31 AL356057.1-201ENST00000533798 831 ntBASIC0.43□□□□□ -2.34
CCDC58Q4VC31 HMGB1P33-201ENST00000563485 527 ntBASIC0.43□□□□□ -2.34
CCDC58Q4VC31 AC109446.2-201ENST00000567872 497 ntBASIC0.43□□□□□ -2.34
CCDC58Q4VC31 MIR4782-201ENST00000577987 79 ntBASIC0.43□□□□□ -2.34
CCDC58Q4VC31 AC130324.3-201ENST00000614165 542 ntBASIC0.43□□□□□ -2.34
CCDC58Q4VC31 RMST_10.1-201ENST00000616309 154 ntBASIC0.43□□□□□ -2.34
CCDC58Q4VC31 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CCDC58Q4VC31 AC068647.2-201ENST00000637380 353 ntBASIC0.43□□□□□ -2.34
CCDC58Q4VC31 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
CCDC58Q4VC31 SNORD114-6-201ENST00000364393 72 ntBASIC0.42□□□□□ -2.34
CCDC58Q4VC31 RNU6-898P-201ENST00000365627 104 ntBASIC0.42□□□□□ -2.34
CCDC58Q4VC31 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.42□□□□□ -2.34
CCDC58Q4VC31 MIR217-201ENST00000384817 110 ntBASIC0.42□□□□□ -2.34
CCDC58Q4VC31 MIR520A-201ENST00000384862 85 ntBASIC0.42□□□□□ -2.34
CCDC58Q4VC31 RPS3AP1-201ENST00000413190 320 ntBASIC0.42□□□□□ -2.34
CCDC58Q4VC31 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.42□□□□□ -2.34
CCDC58Q4VC31 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.42□□□□□ -2.34
CCDC58Q4VC31 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC58Q4VC31 BRK1P2-201ENST00000442875 223 ntBASIC0.42□□□□□ -2.34
CCDC58Q4VC31 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC58Q4VC31 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.42□□□□□ -2.34
CCDC58Q4VC31 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.42□□□□□ -2.34
CCDC58Q4VC31 RNA5SP458-201ENST00000516188 119 ntBASIC0.42□□□□□ -2.34
CCDC58Q4VC31 DEFB108E-201ENST00000524692 240 ntBASIC0.42□□□□□ -2.34
CCDC58Q4VC31 AC011604.1-201ENST00000545978 196 ntBASIC0.42□□□□□ -2.34
CCDC58Q4VC31 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.42□□□□□ -2.34
CCDC58Q4VC31 CYP4A27P-201ENST00000567218 190 ntBASIC0.42□□□□□ -2.34
CCDC58Q4VC31 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.42□□□□□ -2.34
CCDC58Q4VC31 MIR4637-201ENST00000582405 84 ntBASIC0.42□□□□□ -2.34
CCDC58Q4VC31 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
CCDC58Q4VC31 AC008759.3-201ENST00000613300 508 ntBASIC0.42□□□□□ -2.34
CCDC58Q4VC31 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.42□□□□□ -2.34
CCDC58Q4VC31 AC009541.1-201ENST00000438279 2662 ntBASIC0.42□□□□□ -2.34
CCDC58Q4VC31 RNU6-188P-201ENST00000364207 107 ntBASIC0.41□□□□□ -2.34
CCDC58Q4VC31 RNU6-359P-201ENST00000365466 108 ntBASIC0.41□□□□□ -2.34
CCDC58Q4VC31 SUGT1P1-201ENST00000379514 476 ntBASIC0.41□□□□□ -2.34
CCDC58Q4VC31 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC58Q4VC31 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC58Q4VC31 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC58Q4VC31 TMEM251P1-201ENST00000503717 318 ntBASIC0.41□□□□□ -2.34
CCDC58Q4VC31 AC108078.2-201ENST00000510750 236 ntBASIC0.41□□□□□ -2.34
CCDC58Q4VC31 AC074344.1-201ENST00000512823 224 ntBASIC0.41□□□□□ -2.34
CCDC58Q4VC31 TRMT112P2-201ENST00000512910 132 ntBASIC0.41□□□□□ -2.34
CCDC58Q4VC31 RNA5SP384-201ENST00000516615 116 ntBASIC0.41□□□□□ -2.34
CCDC58Q4VC31 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC58Q4VC31 AC008015.1-201ENST00000555505 465 ntBASIC0.41□□□□□ -2.34
CCDC58Q4VC31 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC58Q4VC31 AC104465.1-201ENST00000611365 139 ntBASIC0.41□□□□□ -2.34
CCDC58Q4VC31 AC120349.3-201ENST00000624377 529 ntBASIC0.41□□□□□ -2.34
CCDC58Q4VC31 AC132825.7-201ENST00000638744 335 ntBASIC0.41□□□□□ -2.34
CCDC58Q4VC31 RNA5SP361-201ENST00000362686 118 ntBASIC0.4□□□□□ -2.35
CCDC58Q4VC31 RNU6-288P-201ENST00000363690 104 ntBASIC0.4□□□□□ -2.35
CCDC58Q4VC31 RNU6-110P-201ENST00000384508 104 ntBASIC0.4□□□□□ -2.35
CCDC58Q4VC31 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.4□□□□□ -2.35
CCDC58Q4VC31 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.4□□□□□ -2.35
CCDC58Q4VC31 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.4□□□□□ -2.35
CCDC58Q4VC31 AC244023.1-201ENST00000426884 112 ntBASIC0.4□□□□□ -2.35
CCDC58Q4VC31 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.4□□□□□ -2.35
CCDC58Q4VC31 MTCO3P45-201ENST00000443036 613 ntBASIC0.4□□□□□ -2.35
CCDC58Q4VC31 RNA5SP168-201ENST00000516642 112 ntBASIC0.4□□□□□ -2.35
CCDC58Q4VC31 RNA5SP437-201ENST00000517249 129 ntBASIC0.4□□□□□ -2.35
CCDC58Q4VC31 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.4□□□□□ -2.35
CCDC58Q4VC31 AC012414.2-201ENST00000559474 187 ntBASIC0.4□□□□□ -2.35
CCDC58Q4VC31 CYP3A137P-201ENST00000562436 69 ntBASIC0.4□□□□□ -2.35
CCDC58Q4VC31 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.4□□□□□ -2.35
CCDC58Q4VC31 AC022432.1-201ENST00000595739 310 ntBASIC0.4□□□□□ -2.35
CCDC58Q4VC31 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms