Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SNORA31.18-201ENST00000517043 134 ntBASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 AL356157.2-201ENST00000605122 111 ntBASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 MIR8057-201ENST00000620957 69 ntBASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 AP003355.3-201ENST00000623465 114 ntBASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 Y_RNA.111-201ENST00000363248 100 ntBASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 Y_RNA.151-201ENST00000363566 112 ntBASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 Y_RNA.431-201ENST00000384086 102 ntBASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 AL513475.1-201ENST00000406602 315 ntBASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 RPL31P12-201ENST00000422587 358 ntBASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 AC097462.2-201ENST00000504623 481 ntBASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 ACA59.1-201ENST00000515966 143 ntBASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 SNORA31.23-201ENST00000517219 133 ntBASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 CKS1BP7-201ENST00000522230 235 ntBASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 AC099778.2-201ENST00000610904 211 ntBASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 MIR7112-201ENST00000616126 65 ntBASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 UCA1.1-201ENST00000620952 75 ntBASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC144BQ3MJ40 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 SNORD56.1-201ENST00000362913 68 ntBASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 RNU6-1317P-201ENST00000364582 104 ntBASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 SNORA11.2-201ENST00000408318 127 ntBASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 AC096664.2-201ENST00000411843 406 ntBASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 AC009414.1-201ENST00000427200 443 ntBASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 RN7SL442P-201ENST00000473804 320 ntBASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 RAC1P5-201ENST00000512182 576 ntBASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 RNU6-612P-201ENST00000516909 102 ntBASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 Y_RNA.708-201ENST00000516950 96 ntBASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 AC026333.2-201ENST00000542164 106 ntBASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 PISRT1.1-201ENST00000616930 107 ntBASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 AC138627.2-201ENST00000624202 601 ntBASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC144BQ3MJ40 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC144BQ3MJ40 AP003122.5-201ENST00000527668 3766 ntBASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 RNU4-79P-201ENST00000362764 141 ntBASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 Y_RNA.509-201ENST00000384506 99 ntBASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 AC017079.2-201ENST00000416102 485 ntBASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 SNORD5.1-201ENST00000458800 75 ntBASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 SNORA59A-201ENST00000459326 152 ntBASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 IGKV2-26-201ENST00000518305 343 ntBASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 AP005902.1-201ENST00000521358 186 ntBASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 IGHV3-76-201ENST00000522465 295 ntBASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 AC012493.2-201ENST00000595083 291 ntBASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 AC018462.2-201ENST00000605375 395 ntBASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 MIR8076-201ENST00000611401 83 ntBASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 AC092628.2-201ENST00000622492 339 ntBASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 AC090617.7-201ENST00000623952 126 ntBASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC144BQ3MJ40 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 AL513302.2-201ENST00000562313 1842 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 RNU6-227P-201ENST00000362865 103 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 Y_RNA.67-201ENST00000362870 100 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 RNU6-596P-201ENST00000365395 98 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 U3.19-201ENST00000390893 196 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 SAR1AP2-201ENST00000392696 594 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 BTF3L4P2-201ENST00000392798 346 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 MTCYBP4-201ENST00000401524 249 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 RNU6-370P-201ENST00000411008 104 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 Y_RNA.632-201ENST00000459189 102 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 RPS29P12-201ENST00000460178 152 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 AC008571.1-201ENST00000467232 300 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 AC093027.1-201ENST00000546698 429 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 FRG2DP-202ENST00000566967 323 ntBASIC3.95□□□□□ -1.78
CCDC144BQ3MJ40 MIR3186-201ENST00000577404 85 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms