Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 MTATP6P29-201ENST00000415057 132 ntBASIC3.18□□□□□ -1.9
FOXF2Q12947 Z85995.1-201ENST00000415547 335 ntBASIC3.18□□□□□ -1.9
FOXF2Q12947 AL158156.1-201ENST00000422509 473 ntBASIC3.18□□□□□ -1.9
FOXF2Q12947 EIF4EP2-201ENST00000422816 654 ntBASIC3.18□□□□□ -1.9
FOXF2Q12947 AC007919.1-201ENST00000429380 217 ntBASIC3.18□□□□□ -1.9
FOXF2Q12947 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXF2Q12947 AC104332.1-201ENST00000440471 797 ntBASIC3.18□□□□□ -1.9
FOXF2Q12947 AC133134.1-201ENST00000466800 359 ntBASIC3.18□□□□□ -1.9
FOXF2Q12947 AC025518.1-201ENST00000479856 347 ntBASIC3.18□□□□□ -1.9
FOXF2Q12947 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXF2Q12947 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXF2Q12947 RNU5B-3P-201ENST00000516601 115 ntBASIC3.18□□□□□ -1.9
FOXF2Q12947 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXF2Q12947 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.18□□□□□ -1.9
FOXF2Q12947 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXF2Q12947 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXF2Q12947 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXF2Q12947 AC025946.2-201ENST00000603398 234 ntBASIC3.18□□□□□ -1.9
FOXF2Q12947 RNU6-6P-201ENST00000606623 107 ntBASIC3.18□□□□□ -1.9
FOXF2Q12947 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXF2Q12947 U4.6-201ENST00000621618 127 ntBASIC3.18□□□□□ -1.9
FOXF2Q12947 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXF2Q12947 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
FOXF2Q12947 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
FOXF2Q12947 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
FOXF2Q12947 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
FOXF2Q12947 ZNF299P-201ENST00000406845 1804 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 AL391987.6-201ENST00000305671 199 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 Y_RNA.65-201ENST00000362846 100 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 RNU1-76P-201ENST00000362903 159 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 Y_RNA.237-201ENST00000364439 102 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 RNU6-1317P-201ENST00000364582 104 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 RNU6-708P-201ENST00000384217 107 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 RNU6-700P-201ENST00000391043 107 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 PTMAP5-201ENST00000393073 333 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 MTCO2P33-201ENST00000402100 465 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 Y_RNA.592-201ENST00000410274 109 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 AC096920.1-201ENST00000423991 241 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXF2Q12947 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.17□□□□□ -1.9
FOXF2Q12947 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.17□□□□□ -1.9
FOXF2Q12947 snoU13.24-201ENST00000458998 104 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 RN7SL93P-201ENST00000463035 293 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 AC078918.1-201ENST00000498515 228 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.17□□□□□ -1.9
FOXF2Q12947 SCARNA15.2-201ENST00000516409 127 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXF2Q12947 AC004024.1-201ENST00000549244 247 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.17□□□□□ -1.9
FOXF2Q12947 MIR5701-3-201ENST00000578890 82 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 MIR5701-1-201ENST00000585138 82 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 AC006077.1-201ENST00000604746 343 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.17□□□□□ -1.9
FOXF2Q12947 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 MIR5701-2-201ENST00000615634 82 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.17□□□□□ -1.9
FOXF2Q12947 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.17□□□□□ -1.9
FOXF2Q12947 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.17□□□□□ -1.9
FOXF2Q12947 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXF2Q12947 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.17□□□□□ -1.9
FOXF2Q12947 FAM35DP-201ENST00000323387 2712 ntBASIC3.17□□□□□ -1.9
FOXF2Q12947 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.17□□□□□ -1.9
FOXF2Q12947 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXF2Q12947 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXF2Q12947 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
FOXF2Q12947 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
FOXF2Q12947 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXF2Q12947 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
FOXF2Q12947 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
FOXF2Q12947 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FOXF2Q12947 RPL9P7-201ENST00000330965 580 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
FOXF2Q12947 MIR335-201ENST00000362173 94 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 Y_RNA.54-201ENST00000362766 105 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 Y_RNA.274-201ENST00000364714 101 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 Y_RNA.297-201ENST00000364950 91 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 RNU6-746P-201ENST00000384112 109 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 MIR215-201ENST00000384858 110 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 MIR23A-201ENST00000385245 73 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
FOXF2Q12947 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXF2Q12947 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXF2Q12947 RPL27AP8-201ENST00000424277 446 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 AC092573.2-201ENST00000434546 243 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXF2Q12947 AL513043.1-201ENST00000439124 535 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXF2Q12947 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.16□□□□□ -1.9
FOXF2Q12947 RBMY2UP-201ENST00000453474 324 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 FABP5P15-201ENST00000453566 214 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 RNU6-1037P-201ENST00000459571 107 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 AC008155.2-201ENST00000464337 397 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 RPL9P9-202ENST00000466501 579 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 AC026784.1-201ENST00000507986 352 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 RN7SKP209-201ENST00000516888 304 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 IGKV2-23-201ENST00000518729 323 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 AP004242.1-201ENST00000533701 349 ntBASIC3.16□□□□□ -1.9
FOXF2Q12947 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.16□□□□□ -1.9
FOXF2Q12947 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.16□□□□□ -1.9
FOXF2Q12947 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms