Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 BNIP3P24-201ENST00000593398 557 ntBASIC0.17□□□□□ -2.38
COL7A1Q02388 BBIP1P1-201ENST00000602999 279 ntBASIC0.17□□□□□ -2.38
COL7A1Q02388 AC025588.3-201ENST00000604182 274 ntBASIC0.17□□□□□ -2.38
COL7A1Q02388 AC004805.2-201ENST00000605382 482 ntBASIC0.17□□□□□ -2.38
COL7A1Q02388 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.17□□□□□ -2.38
COL7A1Q02388 AL138713.1-201ENST00000624026 2130 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 U3.8-201ENST00000363675 217 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 RNU6-944P-201ENST00000364023 107 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 RNU6-611P-201ENST00000384276 104 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 MIR518D-201ENST00000385014 87 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 RNU1-119P-201ENST00000391122 165 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 RNU2-64P-201ENST00000411315 191 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AC023141.4-201ENST00000412031 328 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 NDUFS5P4-201ENST00000412983 318 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.16□□□□□ -2.38
COL7A1Q02388 HSPE1P9-201ENST00000440046 311 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AC013267.1-201ENST00000458227 267 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.16□□□□□ -2.38
COL7A1Q02388 RPL21P47-201ENST00000483696 477 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.16□□□□□ -2.38
COL7A1Q02388 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.16□□□□□ -2.38
COL7A1Q02388 AC022447.1-201ENST00000515358 464 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 RNU6-1256P-201ENST00000516539 103 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.16□□□□□ -2.38
COL7A1Q02388 HIGD1AP6-201ENST00000521833 279 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AC107953.1-201ENST00000522216 297 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.16□□□□□ -2.38
COL7A1Q02388 IGKV1-22-201ENST00000524313 326 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.16□□□□□ -2.38
COL7A1Q02388 AC007151.1-201ENST00000572774 483 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 LARP7P2-201ENST00000575306 125 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.16□□□□□ -2.38
COL7A1Q02388 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.16□□□□□ -2.38
COL7A1Q02388 HMGB1P51-201ENST00000605166 638 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AC068276.1-201ENST00000605793 379 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 FTX_3.1-201ENST00000610451 147 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AC005332.6-201ENST00000613178 446 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 U4atac.1-201ENST00000618345 95 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 uc_338.17-201ENST00000619633 179 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AC011155.2-201ENST00000623202 216 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.16□□□□□ -2.38
COL7A1Q02388 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
COL7A1Q02388 RNU6-270P-201ENST00000364131 105 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 RNU6-1078P-201ENST00000364522 103 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 RNU6-217P-201ENST00000384164 104 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 MIR19B1-201ENST00000384829 87 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 MIR135A2-201ENST00000384854 100 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AL139098.1-201ENST00000407291 389 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 RNU2-33P-201ENST00000410344 192 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.16□□□□□ -2.38
COL7A1Q02388 MTCO3P12-201ENST00000416718 547 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AL035410.1-201ENST00000427409 427 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 PAXBP1P1-201ENST00000449315 447 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AC112492.4-201ENST00000456549 352 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 PNPLA4P1-201ENST00000458328 305 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 RNU7-59P-201ENST00000459101 61 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.16□□□□□ -2.38
COL7A1Q02388 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.16□□□□□ -2.38
COL7A1Q02388 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.16□□□□□ -2.38
COL7A1Q02388 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.16□□□□□ -2.38
COL7A1Q02388 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.16□□□□□ -2.38
COL7A1Q02388 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.16□□□□□ -2.38
COL7A1Q02388 SNORA25.11-201ENST00000515935 105 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 RNU6-581P-201ENST00000516214 105 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 ACA59.2-201ENST00000517061 156 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.16□□□□□ -2.38
COL7A1Q02388 C1DP5-201ENST00000525775 383 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.16□□□□□ -2.38
COL7A1Q02388 AC027104.1-201ENST00000563702 681 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AC138915.2-201ENST00000569776 97 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 MIR4768-201ENST00000585270 74 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AC091946.2-201ENST00000606105 291 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 AL391597.1-201ENST00000618707 694 ntBASIC0.16□□□□□ -2.38
COL7A1Q02388 FARSBP1-201ENST00000435808 1778 ntBASIC0.15□□□□□ -2.38
COL7A1Q02388 RNU5A-1-201ENST00000362698 116 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 RNA5SP258-201ENST00000362750 119 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 Y_RNA.67-201ENST00000362870 100 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 RNU6-654P-201ENST00000364373 107 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 RNU6-1151P-201ENST00000384684 107 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 MIR95-201ENST00000385072 81 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 RNU2-28P-201ENST00000410457 189 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 EIF1P1-201ENST00000421436 341 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 UBE2V1P8-201ENST00000437166 265 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 RPEP5-201ENST00000441137 268 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 AL606517.1-201ENST00000446914 387 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 snoU13.9-201ENST00000458927 103 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 MRPS17P3-201ENST00000465453 385 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.15□□□□□ -2.39
COL7A1Q02388 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.15□□□□□ -2.39
COL7A1Q02388 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.15□□□□□ -2.39
COL7A1Q02388 MTCO2P2-201ENST00000591258 225 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 AL358072.1-201ENST00000604156 575 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 AC105148.1-201ENST00000604961 409 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 AL390208.1-201ENST00000605885 644 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 AC004067.1-201ENST00000608733 700 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 AL121652.1-201ENST00000608851 448 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 AC018926.3-201ENST00000618841 406 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 AC084824.4-201ENST00000620106 731 ntBASIC0.15□□□□□ -2.39
COL7A1Q02388 AC068057.2-201ENST00000624047 895 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms