Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC090115.3-201ENST00000553218 849 ntBASIC2.61□□□□□ -1.99
CDK3Q00526 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.61□□□□□ -1.99
CDK3Q00526 AC009163.5-201ENST00000575421 637 ntBASIC2.61□□□□□ -1.99
CDK3Q00526 MIR3941-201ENST00000582572 103 ntBASIC2.61□□□□□ -1.99
CDK3Q00526 VN1R80P-201ENST00000597126 338 ntBASIC2.61□□□□□ -1.99
CDK3Q00526 NRBF2P5-201ENST00000603087 788 ntBASIC2.61□□□□□ -1.99
CDK3Q00526 AC092747.3-201ENST00000603769 301 ntBASIC2.61□□□□□ -1.99
CDK3Q00526 AL670379.10-201ENST00000604330 253 ntBASIC2.61□□□□□ -1.99
CDK3Q00526 AL670379.9-201ENST00000605428 253 ntBASIC2.61□□□□□ -1.99
CDK3Q00526 RNU6-6P-201ENST00000606623 107 ntBASIC2.61□□□□□ -1.99
CDK3Q00526 AC090617.7-201ENST00000623952 126 ntBASIC2.61□□□□□ -1.99
CDK3Q00526 Z69720.2-201ENST00000624755 279 ntBASIC2.61□□□□□ -1.99
CDK3Q00526 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.61□□□□□ -1.99
CDK3Q00526 MIR3688-2-201ENST00000636963 87 ntBASIC2.61□□□□□ -1.99
CDK3Q00526 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDK3Q00526 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CDK3Q00526 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CDK3Q00526 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.6□□□□□ -1.99
CDK3Q00526 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDK3Q00526 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.6□□□□□ -1.99
CDK3Q00526 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDK3Q00526 Y_RNA.89-201ENST00000363031 102 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 Y_RNA.231-201ENST00000364358 102 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 RNU5E-7P-201ENST00000365290 117 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 RNU6-1083P-201ENST00000384022 107 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 SNORD116-20-201ENST00000384529 92 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 MIR514A2-201ENST00000385131 88 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 MIR514A3-201ENST00000385132 88 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 MIR181B1-201ENST00000385240 110 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 AL133475.1-201ENST00000404414 305 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 RPLP0P7-201ENST00000416050 667 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.6□□□□□ -1.99
CDK3Q00526 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.6□□□□□ -1.99
CDK3Q00526 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.6□□□□□ -1.99
CDK3Q00526 AC012308.1-201ENST00000451232 178 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 AC006026.2-201ENST00000457376 180 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 MED28P2-201ENST00000475771 317 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.6□□□□□ -1.99
CDK3Q00526 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CDK3Q00526 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.6□□□□□ -1.99
CDK3Q00526 MTND1P5-201ENST00000517906 940 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.6□□□□□ -1.99
CDK3Q00526 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.6□□□□□ -1.99
CDK3Q00526 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.6□□□□□ -1.99
CDK3Q00526 OR1M4P-201ENST00000589199 287 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 AC123912.5-201ENST00000605470 343 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 AC092807.2-201ENST00000609367 243 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.6□□□□□ -1.99
CDK3Q00526 AC107871.2-201ENST00000612894 502 ntBASIC2.6□□□□□ -1.99
CDK3Q00526 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.6□□□□□ -1.99
CDK3Q00526 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CDK3Q00526 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CDK3Q00526 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CDK3Q00526 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -1.99
CDK3Q00526 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CDK3Q00526 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CDK3Q00526 RNU6-82P-201ENST00000363970 107 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 Y_RNA.295-201ENST00000364918 102 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 RNU6-877P-201ENST00000383868 107 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.59□□□□□ -1.99
CDK3Q00526 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.59□□□□□ -1.99
CDK3Q00526 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 AL365400.1-201ENST00000431854 640 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 ERLEC1P1-201ENST00000433806 578 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.59□□□□□ -1.99
CDK3Q00526 AC087884.1-201ENST00000469738 328 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 RPS26P21-201ENST00000475397 348 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 RPL23AP70-201ENST00000483361 460 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.59□□□□□ -1.99
CDK3Q00526 Y_RNA.654-201ENST00000497848 106 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.59□□□□□ -1.99
CDK3Q00526 SNORA43.2-201ENST00000516652 128 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 RNU6-56P-201ENST00000516986 93 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 AC069113.1-201ENST00000517763 267 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 RPL7P20-201ENST00000520308 745 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 COX6CP5-201ENST00000527162 228 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.59□□□□□ -1.99
CDK3Q00526 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.59□□□□□ -1.99
CDK3Q00526 AC103810.1-201ENST00000579873 453 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 RNU6-89P-201ENST00000606519 100 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 uc_338.14-201ENST00000613162 166 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 RMST_7.1-201ENST00000621935 268 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 AC024614.3-201ENST00000637860 256 ntBASIC2.59□□□□□ -1.99
CDK3Q00526 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.59□□□□□ -1.99
CDK3Q00526 MTND4P5-201ENST00000435821 1374 ntBASIC2.59□□□□□ -2
CDK3Q00526 AC026241.1-201ENST00000517873 2142 ntBASIC2.59□□□□□ -2
CDK3Q00526 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CDK3Q00526 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDK3Q00526 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CDK3Q00526 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDK3Q00526 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.58□□□□□ -2
CDK3Q00526 SNORD62.1-201ENST00000362541 86 ntBASIC2.58□□□□□ -2
CDK3Q00526 RNU6-78P-201ENST00000362897 107 ntBASIC2.58□□□□□ -2
CDK3Q00526 RNU6-534P-201ENST00000364877 106 ntBASIC2.58□□□□□ -2
CDK3Q00526 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.58□□□□□ -2
CDK3Q00526 AL513475.1-201ENST00000406602 315 ntBASIC2.58□□□□□ -2
CDK3Q00526 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.58□□□□□ -2
CDK3Q00526 RNU6-1328P-201ENST00000410938 106 ntBASIC2.58□□□□□ -2
CDK3Q00526 ARL5AP1-201ENST00000418991 388 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms