Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.13□□□□□ -2.23
HOXC5Q00444 AC245060.5-201ENST00000610778 3293 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.13□□□□□ -2.23
HOXC5Q00444 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HOXC5Q00444 snoU2_19.1-201ENST00000362361 80 ntBASIC1.12□□□□□ -2.23
HOXC5Q00444 RNU6-942P-201ENST00000363002 107 ntBASIC1.12□□□□□ -2.23
HOXC5Q00444 RNU6-190P-201ENST00000384154 102 ntBASIC1.12□□□□□ -2.23
HOXC5Q00444 MIR1305-201ENST00000408300 86 ntBASIC1.12□□□□□ -2.23
HOXC5Q00444 SRIP3-201ENST00000413200 219 ntBASIC1.12□□□□□ -2.23
HOXC5Q00444 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.12□□□□□ -2.23
HOXC5Q00444 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.12□□□□□ -2.23
HOXC5Q00444 AC114801.2-201ENST00000503825 781 ntBASIC1.12□□□□□ -2.23
HOXC5Q00444 AC016550.1-201ENST00000505348 785 ntBASIC1.12□□□□□ -2.23
HOXC5Q00444 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.12□□□□□ -2.23
HOXC5Q00444 RNU6-991P-201ENST00000516168 107 ntBASIC1.12□□□□□ -2.23
HOXC5Q00444 SNORA44.1-201ENST00000517031 108 ntBASIC1.12□□□□□ -2.23
HOXC5Q00444 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.12□□□□□ -2.23
HOXC5Q00444 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.12□□□□□ -2.23
HOXC5Q00444 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.12□□□□□ -2.23
HOXC5Q00444 AC084364.2-201ENST00000546924 395 ntBASIC1.12□□□□□ -2.23
HOXC5Q00444 MIR1273C-201ENST00000578669 77 ntBASIC1.12□□□□□ -2.23
HOXC5Q00444 MIR3660-201ENST00000584845 100 ntBASIC1.12□□□□□ -2.23
HOXC5Q00444 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.12□□□□□ -2.23
HOXC5Q00444 MIR15A-201ENST00000607334 83 ntBASIC1.12□□□□□ -2.23
HOXC5Q00444 AL391813.2-201ENST00000609113 322 ntBASIC1.12□□□□□ -2.23
HOXC5Q00444 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.12□□□□□ -2.23
HOXC5Q00444 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
HOXC5Q00444 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HOXC5Q00444 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HOXC5Q00444 SNORA7.1-201ENST00000363750 139 ntBASIC1.11□□□□□ -2.23
HOXC5Q00444 RNY3P13-201ENST00000365542 102 ntBASIC1.11□□□□□ -2.23
HOXC5Q00444 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
HOXC5Q00444 RNU6-723P-201ENST00000383973 107 ntBASIC1.11□□□□□ -2.23
HOXC5Q00444 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.11□□□□□ -2.23
HOXC5Q00444 RNA5SP100-201ENST00000410903 110 ntBASIC1.11□□□□□ -2.23
HOXC5Q00444 RNA5SP59-201ENST00000410922 110 ntBASIC1.11□□□□□ -2.23
HOXC5Q00444 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.11□□□□□ -2.23
HOXC5Q00444 AL365338.1-201ENST00000422282 858 ntBASIC1.11□□□□□ -2.23
HOXC5Q00444 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.11□□□□□ -2.23
HOXC5Q00444 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.11□□□□□ -2.23
HOXC5Q00444 AL353752.1-201ENST00000454946 260 ntBASIC1.11□□□□□ -2.23
HOXC5Q00444 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.11□□□□□ -2.23
HOXC5Q00444 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.11□□□□□ -2.23
HOXC5Q00444 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.11□□□□□ -2.23
HOXC5Q00444 AC072039.2-201ENST00000608883 439 ntBASIC1.11□□□□□ -2.23
HOXC5Q00444 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.11□□□□□ -2.23
HOXC5Q00444 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.11□□□□□ -2.23
HOXC5Q00444 AC093648.1-201ENST00000623546 606 ntBASIC1.11□□□□□ -2.23
HOXC5Q00444 FARSBP1-201ENST00000435808 1778 ntBASIC1.11□□□□□ -2.23
HOXC5Q00444 RNU6-1210P-201ENST00000363775 107 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 SNORA4.1-201ENST00000364263 144 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 RNU6-395P-201ENST00000365662 106 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 RNU6-622P-201ENST00000384272 103 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 SNORD116-20-201ENST00000384529 92 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
HOXC5Q00444 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.1□□□□□ -2.23
HOXC5Q00444 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.1□□□□□ -2.23
HOXC5Q00444 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.1□□□□□ -2.23
HOXC5Q00444 EEF1A1P39-201ENST00000440791 250 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 CALM1P1-201ENST00000442082 433 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 PTENP1-201ENST00000447117 1215 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 AC009474.2-201ENST00000451383 136 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HOXC5Q00444 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.1□□□□□ -2.23
HOXC5Q00444 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.1□□□□□ -2.23
HOXC5Q00444 AP001025.1-201ENST00000486139 332 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 AC093852.1-201ENST00000503587 266 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 AC119751.4-201ENST00000507498 357 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 AC093259.1-201ENST00000509755 300 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.1□□□□□ -2.23
HOXC5Q00444 RN7SKP179-201ENST00000516126 217 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 AC109329.1-201ENST00000518744 317 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 COPS8P3-201ENST00000526024 482 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.1□□□□□ -2.23
HOXC5Q00444 MTND4LP25-201ENST00000570218 163 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.1□□□□□ -2.23
HOXC5Q00444 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.1□□□□□ -2.23
HOXC5Q00444 WISP1-OT1-201ENST00000602893 642 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 RNU6-88P-201ENST00000606801 100 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 AC108747.1-201ENST00000609508 535 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 AC005858.4-201ENST00000623191 700 ntBASIC1.1□□□□□ -2.23
HOXC5Q00444 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HOXC5Q00444 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.1□□□□□ -2.23
HOXC5Q00444 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.09□□□□□ -2.23
HOXC5Q00444 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
HOXC5Q00444 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
HOXC5Q00444 ZNF29P-201ENST00000225587 168 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
HOXC5Q00444 RNU6-23P-201ENST00000363283 107 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
HOXC5Q00444 RNU6-72P-201ENST00000384285 79 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 SNORA48.1-201ENST00000390879 135 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 Y_RNA.623-201ENST00000411128 95 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.09□□□□□ -2.23
HOXC5Q00444 MTCO3P5-201ENST00000433620 714 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 AC003071.1-201ENST00000451219 789 ntBASIC1.09□□□□□ -2.23
HOXC5Q00444 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.09□□□□□ -2.23
HOXC5Q00444 SNORD97-201ENST00000459187 142 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms