Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC079140.3-201ENST00000511111 550 ntBASIC0.45□□□□□ -2.34
RPS28P62857 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.45□□□□□ -2.34
RPS28P62857 RNA5SP121-201ENST00000516537 101 ntBASIC0.45□□□□□ -2.34
RPS28P62857 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.45□□□□□ -2.34
RPS28P62857 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.45□□□□□ -2.34
RPS28P62857 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC0.45□□□□□ -2.34
RPS28P62857 MIR4513-201ENST00000581077 86 ntBASIC0.45□□□□□ -2.34
RPS28P62857 MIR8081-201ENST00000611533 95 ntBASIC0.45□□□□□ -2.34
RPS28P62857 AC007792.1-201ENST00000623023 402 ntBASIC0.45□□□□□ -2.34
RPS28P62857 AP000676.3-201ENST00000623299 569 ntBASIC0.45□□□□□ -2.34
RPS28P62857 AC112204.3-201ENST00000623822 332 ntBASIC0.45□□□□□ -2.34
RPS28P62857 AC231657.1-201ENST00000624313 397 ntBASIC0.45□□□□□ -2.34
RPS28P62857 AL136313.1-201ENST00000624804 202 ntBASIC0.45□□□□□ -2.34
RPS28P62857 RNU4-38P-201ENST00000364472 129 ntBASIC0.44□□□□□ -2.34
RPS28P62857 Y_RNA.332-201ENST00000365271 113 ntBASIC0.44□□□□□ -2.34
RPS28P62857 RNA5SP259-201ENST00000365541 109 ntBASIC0.44□□□□□ -2.34
RPS28P62857 MIR520E-201ENST00000384867 87 ntBASIC0.44□□□□□ -2.34
RPS28P62857 RNU6-817P-201ENST00000391083 104 ntBASIC0.44□□□□□ -2.34
RPS28P62857 RAP1BP3-201ENST00000407180 549 ntBASIC0.44□□□□□ -2.34
RPS28P62857 AC114482.1-201ENST00000418010 247 ntBASIC0.44□□□□□ -2.34
RPS28P62857 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.44□□□□□ -2.34
RPS28P62857 NEFMP1-201ENST00000443423 1006 ntBASIC0.44□□□□□ -2.34
RPS28P62857 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC0.44□□□□□ -2.34
RPS28P62857 AC003071.1-201ENST00000451219 789 ntBASIC0.44□□□□□ -2.34
RPS28P62857 SNORA84-201ENST00000459229 133 ntBASIC0.44□□□□□ -2.34
RPS28P62857 AC103987.1-201ENST00000473394 348 ntBASIC0.44□□□□□ -2.34
RPS28P62857 AC005741.1-201ENST00000511094 432 ntBASIC0.44□□□□□ -2.34
RPS28P62857 SAP18P1-201ENST00000512058 390 ntBASIC0.44□□□□□ -2.34
RPS28P62857 RNA5SP168-201ENST00000516642 112 ntBASIC0.44□□□□□ -2.34
RPS28P62857 RNU6-1315P-201ENST00000517187 99 ntBASIC0.44□□□□□ -2.34
RPS28P62857 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.44□□□□□ -2.34
RPS28P62857 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.44□□□□□ -2.34
RPS28P62857 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.44□□□□□ -2.34
RPS28P62857 MIR5195-201ENST00000583555 115 ntBASIC0.44□□□□□ -2.34
RPS28P62857 AC023043.2-201ENST00000589678 1026 ntBASIC0.44□□□□□ -2.34
RPS28P62857 AC104465.1-201ENST00000611365 139 ntBASIC0.44□□□□□ -2.34
RPS28P62857 uc_338.17-201ENST00000619633 179 ntBASIC0.44□□□□□ -2.34
RPS28P62857 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.43□□□□□ -2.34
RPS28P62857 SNORD3E-201ENST00000362899 217 ntBASIC0.43□□□□□ -2.34
RPS28P62857 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC0.43□□□□□ -2.34
RPS28P62857 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.43□□□□□ -2.34
RPS28P62857 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.43□□□□□ -2.34
RPS28P62857 LARP1BP3-201ENST00000437229 869 ntBASIC0.43□□□□□ -2.34
RPS28P62857 GTF2IP13-201ENST00000438487 386 ntBASIC0.43□□□□□ -2.34
RPS28P62857 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.43□□□□□ -2.34
RPS28P62857 NDUFAF4P3-201ENST00000456468 525 ntBASIC0.43□□□□□ -2.34
RPS28P62857 TRBV12-1-201ENST00000479785 344 ntBASIC0.43□□□□□ -2.34
RPS28P62857 AC024589.1-201ENST00000512207 263 ntBASIC0.43□□□□□ -2.34
RPS28P62857 SNORA31.4-201ENST00000516049 129 ntBASIC0.43□□□□□ -2.34
RPS28P62857 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
RPS28P62857 AC104417.1-201ENST00000523974 751 ntBASIC0.43□□□□□ -2.34
RPS28P62857 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.43□□□□□ -2.34
RPS28P62857 AC092325.1-201ENST00000566449 554 ntBASIC0.43□□□□□ -2.34
RPS28P62857 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.43□□□□□ -2.34
RPS28P62857 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC0.43□□□□□ -2.34
RPS28P62857 AC098483.2-201ENST00000603158 454 ntBASIC0.43□□□□□ -2.34
RPS28P62857 AC105129.3-201ENST00000605455 485 ntBASIC0.43□□□□□ -2.34
RPS28P62857 AL365204.3-201ENST00000612448 685 ntBASIC0.43□□□□□ -2.34
RPS28P62857 AL136360.1-201ENST00000503377 1900 ntBASIC0.42□□□□□ -2.34
RPS28P62857 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
RPS28P62857 RNA5SP361-201ENST00000362686 118 ntBASIC0.42□□□□□ -2.34
RPS28P62857 RNU6-60P-201ENST00000364792 103 ntBASIC0.42□□□□□ -2.34
RPS28P62857 SNORD116-20-201ENST00000384529 92 ntBASIC0.42□□□□□ -2.34
RPS28P62857 MIR194-1-201ENST00000384892 85 ntBASIC0.42□□□□□ -2.34
RPS28P62857 MIR504-201ENST00000385065 83 ntBASIC0.42□□□□□ -2.34
RPS28P62857 RNU6-910P-201ENST00000390844 107 ntBASIC0.42□□□□□ -2.34
RPS28P62857 RNU6-482P-201ENST00000391068 107 ntBASIC0.42□□□□□ -2.34
RPS28P62857 RPS12P24-201ENST00000412619 387 ntBASIC0.42□□□□□ -2.34
RPS28P62857 COX6CP10-201ENST00000416832 224 ntBASIC0.42□□□□□ -2.34
RPS28P62857 TRIM60P13-201ENST00000432350 1283 ntBASIC0.42□□□□□ -2.34
RPS28P62857 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.42□□□□□ -2.34
RPS28P62857 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.42□□□□□ -2.34
RPS28P62857 AL008629.1-201ENST00000438615 184 ntBASIC0.42□□□□□ -2.34
RPS28P62857 AC079776.3-201ENST00000450665 370 ntBASIC0.42□□□□□ -2.34
RPS28P62857 HMGN2P18-201ENST00000450680 270 ntBASIC0.42□□□□□ -2.34
RPS28P62857 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.42□□□□□ -2.34
RPS28P62857 RPL18AP17-201ENST00000455326 198 ntBASIC0.42□□□□□ -2.34
RPS28P62857 RNU6-953P-201ENST00000459154 107 ntBASIC0.42□□□□□ -2.34
RPS28P62857 MTND2P33-201ENST00000506452 1031 ntBASIC0.42□□□□□ -2.34
RPS28P62857 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.42□□□□□ -2.34
RPS28P62857 RNU6-1102P-201ENST00000516149 96 ntBASIC0.42□□□□□ -2.34
RPS28P62857 RNU6-150P-201ENST00000516237 95 ntBASIC0.42□□□□□ -2.34
RPS28P62857 RNU4-54P-201ENST00000516428 129 ntBASIC0.42□□□□□ -2.34
RPS28P62857 RNU6-64P-201ENST00000517119 105 ntBASIC0.42□□□□□ -2.34
RPS28P62857 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.42□□□□□ -2.34
RPS28P62857 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC0.42□□□□□ -2.34
RPS28P62857 LARP7P3-201ENST00000579888 337 ntBASIC0.42□□□□□ -2.34
RPS28P62857 MIR3158-1-201ENST00000583596 81 ntBASIC0.42□□□□□ -2.34
RPS28P62857 BNIP3P16-201ENST00000589779 534 ntBASIC0.42□□□□□ -2.34
RPS28P62857 OR4H6P-202ENST00000603819 340 ntBASIC0.42□□□□□ -2.34
RPS28P62857 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.41□□□□□ -2.34
RPS28P62857 RNU6-853P-201ENST00000364306 107 ntBASIC0.41□□□□□ -2.34
RPS28P62857 RNU6-701P-201ENST00000384059 107 ntBASIC0.41□□□□□ -2.34
RPS28P62857 MIR200A-201ENST00000384875 90 ntBASIC0.41□□□□□ -2.34
RPS28P62857 AL627390.1-201ENST00000396055 340 ntBASIC0.41□□□□□ -2.34
RPS28P62857 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.41□□□□□ -2.34
RPS28P62857 AC123900.1-201ENST00000420390 96 ntBASIC0.41□□□□□ -2.34
RPS28P62857 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.41□□□□□ -2.34
RPS28P62857 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.41□□□□□ -2.34
RPS28P62857 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms