Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.58□□□□□ -2.32
LSM3P62310 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.58□□□□□ -2.32
LSM3P62310 AC211469.2-201ENST00000605461 205 ntBASIC0.58□□□□□ -2.32
LSM3P62310 AL133445.2-201ENST00000611191 527 ntBASIC0.58□□□□□ -2.32
LSM3P62310 AL157770.1-201ENST00000623049 439 ntBASIC0.58□□□□□ -2.32
LSM3P62310 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
LSM3P62310 RNU1-36P-201ENST00000365130 165 ntBASIC0.57□□□□□ -2.32
LSM3P62310 MIR605-201ENST00000385078 83 ntBASIC0.57□□□□□ -2.32
LSM3P62310 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
LSM3P62310 Y_RNA.597-201ENST00000410463 100 ntBASIC0.57□□□□□ -2.32
LSM3P62310 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
LSM3P62310 POLR2J4-204ENST00000418424 324 ntBASIC0.57□□□□□ -2.32
LSM3P62310 RAC1P6-201ENST00000423911 575 ntBASIC0.57□□□□□ -2.32
LSM3P62310 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.57□□□□□ -2.32
LSM3P62310 RPF2P2-201ENST00000504693 896 ntBASIC0.57□□□□□ -2.32
LSM3P62310 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.57□□□□□ -2.32
LSM3P62310 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.57□□□□□ -2.32
LSM3P62310 AC119751.5-201ENST00000514077 770 ntBASIC0.57□□□□□ -2.32
LSM3P62310 RN7SKP88-201ENST00000516847 250 ntBASIC0.57□□□□□ -2.32
LSM3P62310 RNU6-1092P-201ENST00000516955 87 ntBASIC0.57□□□□□ -2.32
LSM3P62310 RN7SKP256-201ENST00000517201 314 ntBASIC0.57□□□□□ -2.32
LSM3P62310 HMGB1P33-201ENST00000563485 527 ntBASIC0.57□□□□□ -2.32
LSM3P62310 AC098483.2-201ENST00000603158 454 ntBASIC0.57□□□□□ -2.32
LSM3P62310 AC090578.1-201ENST00000604955 591 ntBASIC0.57□□□□□ -2.32
LSM3P62310 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
LSM3P62310 7SK.8-201ENST00000612110 250 ntBASIC0.57□□□□□ -2.32
LSM3P62310 7SK.11-201ENST00000615477 250 ntBASIC0.57□□□□□ -2.32
LSM3P62310 7SK.13-201ENST00000622040 250 ntBASIC0.57□□□□□ -2.32
LSM3P62310 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
LSM3P62310 AC068647.2-201ENST00000637380 353 ntBASIC0.57□□□□□ -2.32
LSM3P62310 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.57□□□□□ -2.32
LSM3P62310 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
LSM3P62310 RNU6-1210P-201ENST00000363775 107 ntBASIC0.56□□□□□ -2.32
LSM3P62310 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
LSM3P62310 Y_RNA.408-201ENST00000383987 102 ntBASIC0.56□□□□□ -2.32
LSM3P62310 RNU6-166P-201ENST00000384371 107 ntBASIC0.56□□□□□ -2.32
LSM3P62310 RNU6-14P-201ENST00000384630 106 ntBASIC0.56□□□□□ -2.32
LSM3P62310 MIR634-201ENST00000385208 97 ntBASIC0.56□□□□□ -2.32
LSM3P62310 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
LSM3P62310 RNU11-5P-201ENST00000391216 129 ntBASIC0.56□□□□□ -2.32
LSM3P62310 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.56□□□□□ -2.32
LSM3P62310 USP9YP33-201ENST00000412220 421 ntBASIC0.56□□□□□ -2.32
LSM3P62310 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.56□□□□□ -2.32
LSM3P62310 CST2P1-201ENST00000425770 87 ntBASIC0.56□□□□□ -2.32
LSM3P62310 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.56□□□□□ -2.32
LSM3P62310 AL078601.1-201ENST00000444542 271 ntBASIC0.56□□□□□ -2.32
LSM3P62310 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.56□□□□□ -2.32
LSM3P62310 AL606517.1-201ENST00000446914 387 ntBASIC0.56□□□□□ -2.32
LSM3P62310 SEPT14P24-201ENST00000447236 180 ntBASIC0.56□□□□□ -2.32
LSM3P62310 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.56□□□□□ -2.32
LSM3P62310 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.56□□□□□ -2.32
LSM3P62310 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.56□□□□□ -2.32
LSM3P62310 RNU6-197P-201ENST00000516680 100 ntBASIC0.56□□□□□ -2.32
LSM3P62310 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.56□□□□□ -2.32
LSM3P62310 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.56□□□□□ -2.32
LSM3P62310 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.56□□□□□ -2.32
LSM3P62310 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.56□□□□□ -2.32
LSM3P62310 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.56□□□□□ -2.32
LSM3P62310 AC136618.2-201ENST00000575091 400 ntBASIC0.56□□□□□ -2.32
LSM3P62310 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.56□□□□□ -2.32
LSM3P62310 AP001981.2-201ENST00000603241 418 ntBASIC0.56□□□□□ -2.32
LSM3P62310 AL021879.1-201ENST00000611756 288 ntBASIC0.56□□□□□ -2.32
LSM3P62310 MIR6857-201ENST00000613267 93 ntBASIC0.56□□□□□ -2.32
LSM3P62310 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.56□□□□□ -2.32
LSM3P62310 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
LSM3P62310 AL589994.2-201ENST00000621124 579 ntBASIC0.56□□□□□ -2.32
LSM3P62310 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.56□□□□□ -2.32
LSM3P62310 AC241585.2-209ENST00000638217 143 ntBASIC0.56□□□□□ -2.32
LSM3P62310 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
LSM3P62310 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.56□□□□□ -2.32
LSM3P62310 MTND5P35-201ENST00000557537 1720 ntBASIC0.55□□□□□ -2.32
LSM3P62310 AC009541.1-201ENST00000438279 2662 ntBASIC0.55□□□□□ -2.32
LSM3P62310 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
LSM3P62310 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
LSM3P62310 RNU6-212P-201ENST00000362642 104 ntBASIC0.55□□□□□ -2.32
LSM3P62310 SNORD33-201ENST00000362761 85 ntBASIC0.55□□□□□ -2.32
LSM3P62310 RNA5SP126-201ENST00000365092 109 ntBASIC0.55□□□□□ -2.32
LSM3P62310 RNU6-53P-201ENST00000365367 106 ntBASIC0.55□□□□□ -2.32
LSM3P62310 SNORA40C-201ENST00000391285 128 ntBASIC0.55□□□□□ -2.32
LSM3P62310 CBX3P9-201ENST00000402326 552 ntBASIC0.55□□□□□ -2.32
LSM3P62310 AC068533.2-201ENST00000411872 306 ntBASIC0.55□□□□□ -2.32
LSM3P62310 AC004965.1-201ENST00000413033 213 ntBASIC0.55□□□□□ -2.32
LSM3P62310 AC114482.1-201ENST00000418010 247 ntBASIC0.55□□□□□ -2.32
LSM3P62310 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.55□□□□□ -2.32
LSM3P62310 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
LSM3P62310 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.55□□□□□ -2.32
LSM3P62310 ELOCP30-201ENST00000447108 299 ntBASIC0.55□□□□□ -2.32
LSM3P62310 AC079776.3-201ENST00000450665 370 ntBASIC0.55□□□□□ -2.32
LSM3P62310 RPS27AP8-201ENST00000452665 445 ntBASIC0.55□□□□□ -2.32
LSM3P62310 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.55□□□□□ -2.32
LSM3P62310 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.55□□□□□ -2.32
LSM3P62310 SNORA3.4-201ENST00000515969 96 ntBASIC0.55□□□□□ -2.32
LSM3P62310 CYCSP23-201ENST00000519781 313 ntBASIC0.55□□□□□ -2.32
LSM3P62310 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
LSM3P62310 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.55□□□□□ -2.32
LSM3P62310 AL590229.1-201ENST00000603497 542 ntBASIC0.55□□□□□ -2.32
LSM3P62310 AC112204.3-201ENST00000623822 332 ntBASIC0.55□□□□□ -2.32
LSM3P62310 AL356094.1-201ENST00000624663 1212 ntBASIC0.55□□□□□ -2.32
LSM3P62310 AC092447.10-201ENST00000620607 1652 ntBASIC0.55□□□□□ -2.32
LSM3P62310 CDR1-202ENST00000625883 1485 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms