Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.75□□□□□ -2.29
VBP1P61758 AL078601.1-201ENST00000444542 271 ntBASIC0.75□□□□□ -2.29
VBP1P61758 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.75□□□□□ -2.29
VBP1P61758 TPRKBP1-201ENST00000456243 481 ntBASIC0.75□□□□□ -2.29
VBP1P61758 AC134050.1-201ENST00000495088 933 ntBASIC0.75□□□□□ -2.29
VBP1P61758 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.75□□□□□ -2.29
VBP1P61758 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
VBP1P61758 RNU1-41P-201ENST00000516161 162 ntBASIC0.75□□□□□ -2.29
VBP1P61758 RNU6-150P-201ENST00000516237 95 ntBASIC0.75□□□□□ -2.29
VBP1P61758 RNU1-48P-201ENST00000516400 162 ntBASIC0.75□□□□□ -2.29
VBP1P61758 RNU6-1092P-201ENST00000516955 87 ntBASIC0.75□□□□□ -2.29
VBP1P61758 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.75□□□□□ -2.29
VBP1P61758 AC137800.2-201ENST00000574375 120 ntBASIC0.75□□□□□ -2.29
VBP1P61758 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.75□□□□□ -2.29
VBP1P61758 AL589994.2-201ENST00000621124 579 ntBASIC0.75□□□□□ -2.29
VBP1P61758 AC112204.3-201ENST00000623822 332 ntBASIC0.75□□□□□ -2.29
VBP1P61758 AC231657.1-201ENST00000624313 397 ntBASIC0.75□□□□□ -2.29
VBP1P61758 MIR1248-201ENST00000629190 106 ntBASIC0.75□□□□□ -2.29
VBP1P61758 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.75□□□□□ -2.29
VBP1P61758 RNU6-289P-201ENST00000364093 107 ntBASIC0.74□□□□□ -2.29
VBP1P61758 SNORD114-6-201ENST00000364393 72 ntBASIC0.74□□□□□ -2.29
VBP1P61758 RNU6-207P-201ENST00000384137 107 ntBASIC0.74□□□□□ -2.29
VBP1P61758 RNU6-843P-201ENST00000384454 104 ntBASIC0.74□□□□□ -2.29
VBP1P61758 MIR520A-201ENST00000384862 85 ntBASIC0.74□□□□□ -2.29
VBP1P61758 AL079342.2-201ENST00000403367 482 ntBASIC0.74□□□□□ -2.29
VBP1P61758 RN7SKP61-201ENST00000410642 295 ntBASIC0.74□□□□□ -2.29
VBP1P61758 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.74□□□□□ -2.29
VBP1P61758 CBX3P6-201ENST00000430257 527 ntBASIC0.74□□□□□ -2.29
VBP1P61758 RPS6P15-201ENST00000431996 751 ntBASIC0.74□□□□□ -2.29
VBP1P61758 ELOCP30-201ENST00000447108 299 ntBASIC0.74□□□□□ -2.29
VBP1P61758 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.74□□□□□ -2.29
VBP1P61758 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
VBP1P61758 AC145146.1-201ENST00000496370 254 ntBASIC0.74□□□□□ -2.29
VBP1P61758 RNU6-1225P-201ENST00000516336 65 ntBASIC0.74□□□□□ -2.29
VBP1P61758 RNU6-143P-201ENST00000516942 93 ntBASIC0.74□□□□□ -2.29
VBP1P61758 AL731537.2-201ENST00000561565 951 ntBASIC0.74□□□□□ -2.29
VBP1P61758 HMGB1P33-201ENST00000563485 527 ntBASIC0.74□□□□□ -2.29
VBP1P61758 AC098483.2-201ENST00000603158 454 ntBASIC0.74□□□□□ -2.29
VBP1P61758 MIR6078-201ENST00000611069 100 ntBASIC0.74□□□□□ -2.29
VBP1P61758 AL157834.3-201ENST00000615543 103 ntBASIC0.74□□□□□ -2.29
VBP1P61758 AL136313.1-201ENST00000624804 202 ntBASIC0.74□□□□□ -2.29
VBP1P61758 RNU6-457P-201ENST00000363999 107 ntBASIC0.73□□□□□ -2.29
VBP1P61758 RNU4-51P-201ENST00000364206 140 ntBASIC0.73□□□□□ -2.29
VBP1P61758 Y_RNA.500-201ENST00000384466 111 ntBASIC0.73□□□□□ -2.29
VBP1P61758 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.73□□□□□ -2.29
VBP1P61758 AC016831.2-201ENST00000417179 352 ntBASIC0.73□□□□□ -2.29
VBP1P61758 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.73□□□□□ -2.29
VBP1P61758 RPS27P1-201ENST00000450552 247 ntBASIC0.73□□□□□ -2.29
VBP1P61758 RNU1-131P-201ENST00000458943 161 ntBASIC0.73□□□□□ -2.29
VBP1P61758 SNORA31.19-201ENST00000517079 126 ntBASIC0.73□□□□□ -2.29
VBP1P61758 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.73□□□□□ -2.29
VBP1P61758 CBX3P8-201ENST00000532412 525 ntBASIC0.73□□□□□ -2.29
VBP1P61758 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.73□□□□□ -2.29
VBP1P61758 AC027807.1-201ENST00000559921 996 ntBASIC0.73□□□□□ -2.29
VBP1P61758 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.73□□□□□ -2.29
VBP1P61758 AC025811.1-201ENST00000604312 472 ntBASIC0.73□□□□□ -2.29
VBP1P61758 FAM71BP1-201ENST00000604431 523 ntBASIC0.73□□□□□ -2.29
VBP1P61758 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.73□□□□□ -2.29
VBP1P61758 AC106800.4-201ENST00000614905 153 ntBASIC0.73□□□□□ -2.29
VBP1P61758 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
VBP1P61758 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
VBP1P61758 U8.10-201ENST00000384260 133 ntBASIC0.72□□□□□ -2.29
VBP1P61758 MIR515-2-201ENST00000384883 83 ntBASIC0.72□□□□□ -2.29
VBP1P61758 MIR515-1-201ENST00000384884 83 ntBASIC0.72□□□□□ -2.29
VBP1P61758 MIR222-201ENST00000384992 110 ntBASIC0.72□□□□□ -2.29
VBP1P61758 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
VBP1P61758 UBE2V1P10-201ENST00000414685 269 ntBASIC0.72□□□□□ -2.29
VBP1P61758 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.72□□□□□ -2.29
VBP1P61758 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.72□□□□□ -2.29
VBP1P61758 RAC1P6-201ENST00000423911 575 ntBASIC0.72□□□□□ -2.29
VBP1P61758 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.72□□□□□ -2.29
VBP1P61758 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.72□□□□□ -2.29
VBP1P61758 AL353752.1-201ENST00000454946 260 ntBASIC0.72□□□□□ -2.29
VBP1P61758 snoU13.14-201ENST00000459372 104 ntBASIC0.72□□□□□ -2.29
VBP1P61758 AC104563.1-201ENST00000476147 376 ntBASIC0.72□□□□□ -2.29
VBP1P61758 RNU6-548P-201ENST00000517083 115 ntBASIC0.72□□□□□ -2.29
VBP1P61758 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.72□□□□□ -2.29
VBP1P61758 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.72□□□□□ -2.29
VBP1P61758 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.72□□□□□ -2.29
VBP1P61758 MTCYBP33-201ENST00000575007 1130 ntBASIC0.72□□□□□ -2.29
VBP1P61758 AP005136.1-201ENST00000579765 429 ntBASIC0.72□□□□□ -2.29
VBP1P61758 AC008088.1-201ENST00000580993 280 ntBASIC0.72□□□□□ -2.29
VBP1P61758 AC078795.2-201ENST00000602835 1252 ntBASIC0.72□□□□□ -2.29
VBP1P61758 AC063943.3-201ENST00000615562 356 ntBASIC0.72□□□□□ -2.29
VBP1P61758 AC092656.1-203ENST00000624134 423 ntBASIC0.72□□□□□ -2.29
VBP1P61758 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.72□□□□□ -2.29
VBP1P61758 AL079343.1-201ENST00000572358 1771 ntBASIC0.72□□□□□ -2.29
VBP1P61758 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
VBP1P61758 SNORA4.1-201ENST00000364263 144 ntBASIC0.71□□□□□ -2.3
VBP1P61758 AC009518.2-201ENST00000418056 731 ntBASIC0.71□□□□□ -2.3
VBP1P61758 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.71□□□□□ -2.3
VBP1P61758 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.71□□□□□ -2.3
VBP1P61758 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.71□□□□□ -2.3
VBP1P61758 AC136628.3-201ENST00000521868 290 ntBASIC0.71□□□□□ -2.3
VBP1P61758 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.71□□□□□ -2.3
VBP1P61758 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.71□□□□□ -2.3
VBP1P61758 MIR4293-201ENST00000584305 78 ntBASIC0.71□□□□□ -2.3
VBP1P61758 AC022022.2-201ENST00000602989 360 ntBASIC0.71□□□□□ -2.3
VBP1P61758 BNIP3P31-201ENST00000604515 566 ntBASIC0.71□□□□□ -2.3
VBP1P61758 RPL21P136-201ENST00000605378 396 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms