Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.84□□□□□ -1.95
SEC61A1P61619 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.84□□□□□ -1.95
SEC61A1P61619 AL121917.1-203ENST00000605534 577 ntBASIC2.84□□□□□ -1.95
SEC61A1P61619 RNU6-6P-201ENST00000606623 107 ntBASIC2.84□□□□□ -1.95
SEC61A1P61619 AC116312.1-201ENST00000606841 314 ntBASIC2.84□□□□□ -1.95
SEC61A1P61619 AC138627.2-201ENST00000624202 601 ntBASIC2.84□□□□□ -1.95
SEC61A1P61619 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.84□□□□□ -1.95
SEC61A1P61619 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SEC61A1P61619 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.84□□□□□ -1.96
SEC61A1P61619 MTND5P7-201ENST00000413558 1798 ntBASIC2.84□□□□□ -1.96
SEC61A1P61619 MTND4P1-201ENST00000457501 1466 ntBASIC2.84□□□□□ -1.96
SEC61A1P61619 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.83□□□□□ -1.96
SEC61A1P61619 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
SEC61A1P61619 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.83□□□□□ -1.96
SEC61A1P61619 Y_RNA.2-201ENST00000362330 96 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 Y_RNA.202-201ENST00000364083 110 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 RNU6-593P-201ENST00000364716 112 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 SNORA33.2-201ENST00000365413 134 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 MIR517A-201ENST00000385001 87 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 RNA5SP344-201ENST00000411081 104 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.83□□□□□ -1.96
SEC61A1P61619 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.83□□□□□ -1.96
SEC61A1P61619 AC005326.1-201ENST00000429197 123 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 SNRPEP9-201ENST00000436794 238 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.83□□□□□ -1.96
SEC61A1P61619 FTH1P25-201ENST00000447665 469 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 AL031274.1-201ENST00000450334 232 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 UQCRHP3-201ENST00000451503 251 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 RN7SL601P-201ENST00000471221 293 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.83□□□□□ -1.96
SEC61A1P61619 FCF1P8-201ENST00000510322 597 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 SMURF2P1-201ENST00000514992 481 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 RNU6-1282P-201ENST00000516735 96 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 SNORA31.19-201ENST00000517079 126 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.83□□□□□ -1.96
SEC61A1P61619 AMZ2P1-203ENST00000565833 850 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.83□□□□□ -1.96
SEC61A1P61619 AC100830.2-201ENST00000581636 240 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.83□□□□□ -1.96
SEC61A1P61619 MTND4LP5-201ENST00000605152 292 ntBASIC2.83□□□□□ -1.96
SEC61A1P61619 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.83□□□□□ -1.96
SEC61A1P61619 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.83□□□□□ -1.96
SEC61A1P61619 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.83□□□□□ -1.96
SEC61A1P61619 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SEC61A1P61619 AC002546.1-201ENST00000588041 2504 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SEC61A1P61619 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.82□□□□□ -1.96
SEC61A1P61619 RNU6-884P-201ENST00000363889 107 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 SNORA63C-201ENST00000364578 129 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SEC61A1P61619 RNU6-1035P-201ENST00000384477 107 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 RNU6-738P-201ENST00000384531 106 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 SNORA46-201ENST00000384762 135 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 MIR10A-201ENST00000385043 110 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SEC61A1P61619 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 RNA5SP120-201ENST00000410900 112 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.82□□□□□ -1.96
SEC61A1P61619 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.82□□□□□ -1.96
SEC61A1P61619 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.82□□□□□ -1.96
SEC61A1P61619 UBE2V1P4-201ENST00000425374 344 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 TRIAP1P1-201ENST00000427062 225 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SEC61A1P61619 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.82□□□□□ -1.96
SEC61A1P61619 AL160004.2-201ENST00000432935 350 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 AL137792.2-201ENST00000443484 235 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.82□□□□□ -1.96
SEC61A1P61619 AC010099.1-201ENST00000455434 375 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 snoU13.28-201ENST00000459235 104 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 snoU109.2-201ENST00000459316 135 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 Y_RNA.661-201ENST00000516003 99 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 RNU6-1045P-201ENST00000516321 107 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 SCARNA16.2-201ENST00000516520 172 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 RNU6-572P-201ENST00000516724 80 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.82□□□□□ -1.96
SEC61A1P61619 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.82□□□□□ -1.96
SEC61A1P61619 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.82□□□□□ -1.96
SEC61A1P61619 DNAJC8P1-201ENST00000554535 372 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.82□□□□□ -1.96
SEC61A1P61619 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.82□□□□□ -1.96
SEC61A1P61619 MIR4276-201ENST00000584832 70 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 AC006504.6-201ENST00000590142 199 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 AC011494.1-201ENST00000596454 237 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 AL160281.1-201ENST00000605307 311 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 FTX_3.1-201ENST00000610451 147 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 AC133104.2-201ENST00000615272 193 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 RMST_4.1-201ENST00000616886 107 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 MIR6076-201ENST00000617521 113 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 PLCE1P1-201ENST00000622094 305 ntBASIC2.82□□□□□ -1.96
SEC61A1P61619 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.82□□□□□ -1.96
SEC61A1P61619 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SEC61A1P61619 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SEC61A1P61619 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SEC61A1P61619 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
SEC61A1P61619 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
SEC61A1P61619 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SEC61A1P61619 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SEC61A1P61619 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SEC61A1P61619 MIR412-201ENST00000362142 91 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms