Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC084781.2-201ENST00000615568 161 ntBASIC2.86□□□□□ -1.95
CDH12P55289 AC006133.1-201ENST00000617106 264 ntBASIC2.86□□□□□ -1.95
CDH12P55289 AC006111.3-201ENST00000622137 383 ntBASIC2.86□□□□□ -1.95
CDH12P55289 SCARNA4-202ENST00000625402 129 ntBASIC2.86□□□□□ -1.95
CDH12P55289 MTCO1P12-201ENST00000414273 1543 ntBASIC2.86□□□□□ -1.95
CDH12P55289 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.86□□□□□ -1.95
CDH12P55289 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDH12P55289 AC010680.1-201ENST00000590024 3590 ntBASIC2.86□□□□□ -1.95
CDH12P55289 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH12P55289 GABRG2-229ENST00000641017 3628 ntBASIC2.86□□□□□ -1.95
CDH12P55289 CDC27P3-201ENST00000635418 1910 ntBASIC2.85□□□□□ -1.95
CDH12P55289 FAM35CP-201ENST00000554755 2470 ntBASIC2.85□□□□□ -1.95
CDH12P55289 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDH12P55289 AC110491.1-201ENST00000562191 2010 ntBASIC2.85□□□□□ -1.95
CDH12P55289 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.85□□□□□ -1.95
CDH12P55289 RNU6-1059P-201ENST00000363752 98 ntBASIC2.85□□□□□ -1.95
CDH12P55289 RNU6-593P-201ENST00000364716 112 ntBASIC2.85□□□□□ -1.95
CDH12P55289 RNU1-100P-201ENST00000365255 165 ntBASIC2.85□□□□□ -1.95
CDH12P55289 RNU5E-7P-201ENST00000365290 117 ntBASIC2.85□□□□□ -1.95
CDH12P55289 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH12P55289 MIR183-201ENST00000384958 110 ntBASIC2.85□□□□□ -1.95
CDH12P55289 Y_RNA.579-201ENST00000390939 94 ntBASIC2.85□□□□□ -1.95
CDH12P55289 RNU6-325P-201ENST00000411132 105 ntBASIC2.85□□□□□ -1.95
CDH12P55289 AC023141.4-201ENST00000412031 328 ntBASIC2.85□□□□□ -1.95
CDH12P55289 MTCO2P27-201ENST00000420740 428 ntBASIC2.85□□□□□ -1.95
CDH12P55289 SAR1AP4-201ENST00000429225 591 ntBASIC2.85□□□□□ -1.95
CDH12P55289 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH12P55289 HIGD1AP2-201ENST00000446367 280 ntBASIC2.85□□□□□ -1.95
CDH12P55289 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDH12P55289 AC091179.1-201ENST00000461606 579 ntBASIC2.85□□□□□ -1.95
CDH12P55289 AC128713.1-201ENST00000471495 306 ntBASIC2.85□□□□□ -1.95
CDH12P55289 RN7SL20P-201ENST00000488827 297 ntBASIC2.85□□□□□ -1.95
CDH12P55289 RN7SL633P-201ENST00000488974 297 ntBASIC2.85□□□□□ -1.95
CDH12P55289 AC018437.1-201ENST00000492214 406 ntBASIC2.85□□□□□ -1.95
CDH12P55289 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH12P55289 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.85□□□□□ -1.95
CDH12P55289 AC005741.1-201ENST00000511094 432 ntBASIC2.85□□□□□ -1.95
CDH12P55289 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH12P55289 SNORA31.1-201ENST00000515993 133 ntBASIC2.85□□□□□ -1.95
CDH12P55289 SNORA31.5-201ENST00000516190 133 ntBASIC2.85□□□□□ -1.95
CDH12P55289 RNU1-54P-201ENST00000517181 120 ntBASIC2.85□□□□□ -1.95
CDH12P55289 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.85□□□□□ -1.95
CDH12P55289 NACAP3-201ENST00000552100 481 ntBASIC2.85□□□□□ -1.95
CDH12P55289 AC021739.1-201ENST00000559631 174 ntBASIC2.85□□□□□ -1.95
CDH12P55289 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.85□□□□□ -1.95
CDH12P55289 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.85□□□□□ -1.95
CDH12P55289 MIR4506-201ENST00000584693 77 ntBASIC2.85□□□□□ -1.95
CDH12P55289 AC018462.2-201ENST00000605375 395 ntBASIC2.85□□□□□ -1.95
CDH12P55289 AC124303.1-201ENST00000605703 360 ntBASIC2.85□□□□□ -1.95
CDH12P55289 AC019176.2-201ENST00000611579 315 ntBASIC2.85□□□□□ -1.95
CDH12P55289 AC090617.7-201ENST00000623952 126 ntBASIC2.85□□□□□ -1.95
CDH12P55289 U6.105-201ENST00000637379 88 ntBASIC2.85□□□□□ -1.95
CDH12P55289 U4.7-201ENST00000638126 106 ntBASIC2.85□□□□□ -1.95
CDH12P55289 KPNA2P1-201ENST00000458289 1591 ntBASIC2.85□□□□□ -1.95
CDH12P55289 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.85□□□□□ -1.95
CDH12P55289 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDH12P55289 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CDH12P55289 Y_RNA.431-201ENST00000384086 102 ntBASIC2.84□□□□□ -1.95
CDH12P55289 RNU6-43P-201ENST00000384302 107 ntBASIC2.84□□□□□ -1.95
CDH12P55289 MIR517A-201ENST00000385001 87 ntBASIC2.84□□□□□ -1.95
CDH12P55289 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.84□□□□□ -1.95
CDH12P55289 AL354751.2-201ENST00000415471 210 ntBASIC2.84□□□□□ -1.95
CDH12P55289 USP9YP30-201ENST00000430729 455 ntBASIC2.84□□□□□ -1.95
CDH12P55289 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.84□□□□□ -1.95
CDH12P55289 Z75741.1-201ENST00000446793 314 ntBASIC2.84□□□□□ -1.95
CDH12P55289 SNORA84-201ENST00000459229 133 ntBASIC2.84□□□□□ -1.95
CDH12P55289 AP004217.1-201ENST00000480579 346 ntBASIC2.84□□□□□ -1.95
CDH12P55289 AC006483.1-201ENST00000487308 313 ntBASIC2.84□□□□□ -1.95
CDH12P55289 PTP4A1P4-201ENST00000512479 322 ntBASIC2.84□□□□□ -1.95
CDH12P55289 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH12P55289 RNU6-581P-201ENST00000516214 105 ntBASIC2.84□□□□□ -1.95
CDH12P55289 Y_RNA.670-201ENST00000516255 105 ntBASIC2.84□□□□□ -1.95
CDH12P55289 SNORA43.2-201ENST00000516652 128 ntBASIC2.84□□□□□ -1.95
CDH12P55289 AC109479.2-201ENST00000517842 174 ntBASIC2.84□□□□□ -1.95
CDH12P55289 AP004607.1-201ENST00000524456 203 ntBASIC2.84□□□□□ -1.95
CDH12P55289 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.84□□□□□ -1.95
CDH12P55289 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CDH12P55289 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH12P55289 AC009314.1-201ENST00000603871 304 ntBASIC2.84□□□□□ -1.95
CDH12P55289 AP000654.2-201ENST00000605633 586 ntBASIC2.84□□□□□ -1.95
CDH12P55289 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.84□□□□□ -1.95
CDH12P55289 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH12P55289 AL669831.3-213ENST00000636676 183 ntBASIC2.84□□□□□ -1.95
CDH12P55289 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.84□□□□□ -1.95
CDH12P55289 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CDH12P55289 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CDH12P55289 AC093010.3-201ENST00000570269 15214 ntBASIC2.84□□□□□ -1.96
CDH12P55289 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
CDH12P55289 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CDH12P55289 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CDH12P55289 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDH12P55289 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.83□□□□□ -1.96
CDH12P55289 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDH12P55289 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.83□□□□□ -1.96
CDH12P55289 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CDH12P55289 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDH12P55289 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.83□□□□□ -1.96
CDH12P55289 Y_RNA.404-201ENST00000383978 102 ntBASIC2.83□□□□□ -1.96
CDH12P55289 RNU6-310P-201ENST00000384655 107 ntBASIC2.83□□□□□ -1.96
CDH12P55289 MIR449B-201ENST00000384995 97 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms