Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.59□□□□□ -1.99
CDH11P55287 AC107016.2-201ENST00000547968 190 ntBASIC2.59□□□□□ -1.99
CDH11P55287 MIR5692C1-201ENST00000585309 91 ntBASIC2.59□□□□□ -1.99
CDH11P55287 NUTF2P8-201ENST00000604593 363 ntBASIC2.59□□□□□ -1.99
CDH11P55287 APOOP1-201ENST00000604695 592 ntBASIC2.59□□□□□ -1.99
CDH11P55287 AC123912.5-201ENST00000605470 343 ntBASIC2.59□□□□□ -1.99
CDH11P55287 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH11P55287 AL121757.2-201ENST00000611223 313 ntBASIC2.59□□□□□ -1.99
CDH11P55287 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.59□□□□□ -1.99
CDH11P55287 RMST_7.1-201ENST00000621935 268 ntBASIC2.59□□□□□ -1.99
CDH11P55287 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.59□□□□□ -1.99
CDH11P55287 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.59□□□□□ -2
CDH11P55287 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDH11P55287 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
CDH11P55287 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CDH11P55287 Y_RNA.72-201ENST00000362894 103 ntBASIC2.58□□□□□ -2
CDH11P55287 RNU6-799P-201ENST00000363567 107 ntBASIC2.58□□□□□ -2
CDH11P55287 RNU6-831P-201ENST00000384548 107 ntBASIC2.58□□□□□ -2
CDH11P55287 Y_RNA.530-201ENST00000384587 101 ntBASIC2.58□□□□□ -2
CDH11P55287 RNU6-876P-201ENST00000391295 104 ntBASIC2.58□□□□□ -2
CDH11P55287 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.58□□□□□ -2
CDH11P55287 RPL21P111-201ENST00000418453 477 ntBASIC2.58□□□□□ -2
CDH11P55287 MTCO3P46-201ENST00000425787 232 ntBASIC2.58□□□□□ -2
CDH11P55287 NDUFA5P4-201ENST00000436704 385 ntBASIC2.58□□□□□ -2
CDH11P55287 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.58□□□□□ -2
CDH11P55287 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.58□□□□□ -2
CDH11P55287 AC128713.1-201ENST00000471495 306 ntBASIC2.58□□□□□ -2
CDH11P55287 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.58□□□□□ -2
CDH11P55287 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.58□□□□□ -2
CDH11P55287 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.58□□□□□ -2
CDH11P55287 SCGB1D5P-201ENST00000515134 247 ntBASIC2.58□□□□□ -2
CDH11P55287 ELOCP31-201ENST00000540463 467 ntBASIC2.58□□□□□ -2
CDH11P55287 AC006199.1-201ENST00000548728 219 ntBASIC2.58□□□□□ -2
CDH11P55287 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.58□□□□□ -2
CDH11P55287 AC008669.1-201ENST00000565823 2178 ntBASIC2.58□□□□□ -2
CDH11P55287 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CDH11P55287 AP003122.5-201ENST00000527668 3766 ntBASIC2.58□□□□□ -2
CDH11P55287 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CDH11P55287 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
CDH11P55287 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.57□□□□□ -2
CDH11P55287 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CDH11P55287 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CDH11P55287 Y_RNA.160-201ENST00000363677 92 ntBASIC2.57□□□□□ -2
CDH11P55287 RNU1-100P-201ENST00000365255 165 ntBASIC2.57□□□□□ -2
CDH11P55287 RNU1-109P-201ENST00000383960 147 ntBASIC2.57□□□□□ -2
CDH11P55287 U3.37-201ENST00000408528 213 ntBASIC2.57□□□□□ -2
CDH11P55287 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.57□□□□□ -2
CDH11P55287 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.57□□□□□ -2
CDH11P55287 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.57□□□□□ -2
CDH11P55287 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.57□□□□□ -2
CDH11P55287 RPL23AP58-201ENST00000440453 469 ntBASIC2.57□□□□□ -2
CDH11P55287 snoU109.2-201ENST00000459316 135 ntBASIC2.57□□□□□ -2
CDH11P55287 AC104472.2-201ENST00000469035 601 ntBASIC2.57□□□□□ -2
CDH11P55287 RPL7P43-201ENST00000478876 753 ntBASIC2.57□□□□□ -2
CDH11P55287 AC079140.5-201ENST00000507882 310 ntBASIC2.57□□□□□ -2
CDH11P55287 SNORA19.2-201ENST00000516013 114 ntBASIC2.57□□□□□ -2
CDH11P55287 Y_RNA.687-201ENST00000516558 91 ntBASIC2.57□□□□□ -2
CDH11P55287 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.57□□□□□ -2
CDH11P55287 DNAJC8P1-201ENST00000554535 372 ntBASIC2.57□□□□□ -2
CDH11P55287 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.57□□□□□ -2
CDH11P55287 AC005261.5-201ENST00000596280 355 ntBASIC2.57□□□□□ -2
CDH11P55287 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CDH11P55287 AC004852.3-201ENST00000614131 326 ntBASIC2.57□□□□□ -2
CDH11P55287 AC022306.2-201ENST00000617563 647 ntBASIC2.57□□□□□ -2
CDH11P55287 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.57□□□□□ -2
CDH11P55287 AC009248.2-201ENST00000619826 254 ntBASIC2.57□□□□□ -2
CDH11P55287 AC138627.2-201ENST00000624202 601 ntBASIC2.57□□□□□ -2
CDH11P55287 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.56□□□□□ -2
CDH11P55287 Y_RNA.414-201ENST00000384011 101 ntBASIC2.56□□□□□ -2
CDH11P55287 MIR34A-201ENST00000385130 110 ntBASIC2.56□□□□□ -2
CDH11P55287 AL512633.1-201ENST00000399931 655 ntBASIC2.56□□□□□ -2
CDH11P55287 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.56□□□□□ -2
CDH11P55287 MTND4LP11-201ENST00000422184 280 ntBASIC2.56□□□□□ -2
CDH11P55287 AC009414.1-201ENST00000427200 443 ntBASIC2.56□□□□□ -2
CDH11P55287 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.56□□□□□ -2
CDH11P55287 BTF3P15-201ENST00000455606 336 ntBASIC2.56□□□□□ -2
CDH11P55287 AC003982.1-202ENST00000469928 248 ntBASIC2.56□□□□□ -2
CDH11P55287 RPS29P26-201ENST00000477483 171 ntBASIC2.56□□□□□ -2
CDH11P55287 HMGN1P12-201ENST00000499125 195 ntBASIC2.56□□□□□ -2
CDH11P55287 HPRT1P3-201ENST00000539521 576 ntBASIC2.56□□□□□ -2
CDH11P55287 AL121579.1-201ENST00000555129 305 ntBASIC2.56□□□□□ -2
CDH11P55287 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CDH11P55287 MIR548S-201ENST00000581352 82 ntBASIC2.56□□□□□ -2
CDH11P55287 MIR3605-201ENST00000583214 100 ntBASIC2.56□□□□□ -2
CDH11P55287 MIR3942-201ENST00000585264 109 ntBASIC2.56□□□□□ -2
CDH11P55287 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CDH11P55287 MIR6852-201ENST00000621699 66 ntBASIC2.56□□□□□ -2
CDH11P55287 AC002064.3-201ENST00000623448 346 ntBASIC2.56□□□□□ -2
CDH11P55287 AC110079.1-202ENST00000635213 138 ntBASIC2.56□□□□□ -2
CDH11P55287 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.56□□□□□ -2
CDH11P55287 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.55□□□□□ -2
CDH11P55287 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.55□□□□□ -2
CDH11P55287 AC138393.1-203ENST00000327086 343 ntBASIC2.55□□□□□ -2
CDH11P55287 SNORA72.1-201ENST00000363485 129 ntBASIC2.55□□□□□ -2
CDH11P55287 SNORD113-7-201ENST00000363762 77 ntBASIC2.55□□□□□ -2
CDH11P55287 CD24P4-201ENST00000382840 243 ntBASIC2.55□□□□□ -2
CDH11P55287 Y_RNA.510-201ENST00000384511 114 ntBASIC2.55□□□□□ -2
CDH11P55287 RNU6-750P-201ENST00000390946 107 ntBASIC2.55□□□□□ -2
CDH11P55287 RNU2-49P-201ENST00000410666 184 ntBASIC2.55□□□□□ -2
CDH11P55287 SNORD56-201ENST00000413522 71 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms