Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AP003122.3-201ENST00000526316 255 ntBASIC2.52□□□□□ -2.01
LIMK2P53671 AC084851.1-201ENST00000529105 249 ntBASIC2.52□□□□□ -2.01
LIMK2P53671 AP005435.4-201ENST00000529514 284 ntBASIC2.52□□□□□ -2.01
LIMK2P53671 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.52□□□□□ -2.01
LIMK2P53671 ADI1P3-201ENST00000549509 470 ntBASIC2.52□□□□□ -2.01
LIMK2P53671 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.52□□□□□ -2.01
LIMK2P53671 AL138976.2-201ENST00000563989 694 ntBASIC2.52□□□□□ -2.01
LIMK2P53671 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.52□□□□□ -2.01
LIMK2P53671 AC009994.1-201ENST00000606889 253 ntBASIC2.52□□□□□ -2.01
LIMK2P53671 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.52□□□□□ -2.01
LIMK2P53671 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
LIMK2P53671 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.52□□□□□ -2.01
LIMK2P53671 AL512643.1-201ENST00000635735 524 ntBASIC2.52□□□□□ -2.01
LIMK2P53671 Z99571.1-201ENST00000636677 394 ntBASIC2.52□□□□□ -2.01
LIMK2P53671 MTND5P17-201ENST00000418405 1603 ntBASIC2.52□□□□□ -2.01
LIMK2P53671 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.52□□□□□ -2.01
LIMK2P53671 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LIMK2P53671 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
LIMK2P53671 MTND4P35-201ENST00000604257 1375 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 AL139276.1-201ENST00000311910 1001 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 Y_RNA.86-201ENST00000363020 111 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 Y_RNA.279-201ENST00000364763 95 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 XGY1-201ENST00000381172 446 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 SNORA24.1-201ENST00000384401 135 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 AL356057.2-201ENST00000403318 432 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 RNA5SP118-201ENST00000410385 109 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.51□□□□□ -2.01
LIMK2P53671 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.51□□□□□ -2.01
LIMK2P53671 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.51□□□□□ -2.01
LIMK2P53671 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.51□□□□□ -2.01
LIMK2P53671 OOSP1P1-201ENST00000423265 274 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 BRK1P2-201ENST00000442875 223 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.51□□□□□ -2.01
LIMK2P53671 RNU7-182P-201ENST00000459009 62 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 RPS15AP34-201ENST00000487776 387 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 HMGN1P12-201ENST00000499125 195 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 AC091951.2-201ENST00000500762 203 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 RNU6-914P-201ENST00000516749 109 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 RN7SKP219-201ENST00000516825 296 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 SNORD60.2-201ENST00000516883 86 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 RPL7P20-201ENST00000520308 745 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 CENPUP1-201ENST00000526649 1202 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 OR5AL2P-201ENST00000532185 920 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.51□□□□□ -2.01
LIMK2P53671 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.51□□□□□ -2.01
LIMK2P53671 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LIMK2P53671 AC010525.2-201ENST00000590920 195 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 BNIP3P10-201ENST00000605360 577 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 AC130324.3-201ENST00000614165 542 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 AP001486.3-201ENST00000615334 372 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 AC104260.1-201ENST00000616660 539 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 AL590808.1-201ENST00000618696 141 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 MIR3199-2-201ENST00000636243 86 ntBASIC2.51□□□□□ -2.01
LIMK2P53671 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
LIMK2P53671 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
LIMK2P53671 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
LIMK2P53671 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
LIMK2P53671 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LIMK2P53671 CBX3P1-201ENST00000325243 554 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.5□□□□□ -2.01
LIMK2P53671 RNU6-179P-201ENST00000363350 107 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 U8.8-201ENST00000365399 135 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 RNU6-61P-201ENST00000365528 109 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 SET-203ENST00000372688 801 ntTSL 2 BASIC2.5□□□□□ -2.01
LIMK2P53671 RNU6-658P-201ENST00000384606 106 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 RNU6-903P-201ENST00000391270 109 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 RNA5SP181-201ENST00000410246 98 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 AC092809.3-201ENST00000415453 231 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.5□□□□□ -2.01
LIMK2P53671 RPS15AP7-201ENST00000439294 405 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 AL118520.1-201ENST00000450770 291 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 PMCHL2-203ENST00000457791 237 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 AL162395.1-201ENST00000457882 422 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 EIF4EP3-201ENST00000498782 656 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 RNU6-875P-201ENST00000516488 106 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 SNORA31.15-201ENST00000516771 132 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 SCARNA11.3-201ENST00000517276 130 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.5□□□□□ -2.01
LIMK2P53671 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.5□□□□□ -2.01
LIMK2P53671 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.5□□□□□ -2.01
LIMK2P53671 AC011155.2-201ENST00000623202 216 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 AC025034.2-201ENST00000623264 286 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.5□□□□□ -2.01
LIMK2P53671 CTSLP2-204ENST00000629029 392 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 AL354685.2-201ENST00000448218 1447 ntBASIC2.5□□□□□ -2.01
LIMK2P53671 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LIMK2P53671 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
LIMK2P53671 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.49□□□□□ -2.01
LIMK2P53671 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.49□□□□□ -2.01
LIMK2P53671 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LIMK2P53671 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.49□□□□□ -2.01
LIMK2P53671 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
LIMK2P53671 RNU6-552P-201ENST00000362869 119 ntBASIC2.49□□□□□ -2.01
LIMK2P53671 Y_RNA.157-201ENST00000363638 102 ntBASIC2.49□□□□□ -2.01
LIMK2P53671 RNA5SP456-201ENST00000364002 114 ntBASIC2.49□□□□□ -2.01
LIMK2P53671 SNORD115-7-201ENST00000365306 82 ntBASIC2.49□□□□□ -2.01
LIMK2P53671 RNU4-20P-201ENST00000365601 151 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms