Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SCOCP1-201ENST00000554676 349 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.94□□□□□ -1.94
CLCN3P51790 MIR3605-201ENST00000583214 100 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 AL356055.1-201ENST00000602528 446 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 AC087045.1-201ENST00000605856 382 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 AL132765.2-201ENST00000610812 351 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 RMST_4.1-201ENST00000616886 107 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 AC092608.2-201ENST00000624427 218 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 U6.99-201ENST00000637524 83 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 AC112487.2-201ENST00000637950 304 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CLCN3P51790 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLCN3P51790 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.93□□□□□ -1.94
CLCN3P51790 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.93□□□□□ -1.94
CLCN3P51790 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLCN3P51790 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.93□□□□□ -1.94
CLCN3P51790 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLCN3P51790 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLCN3P51790 RNU4-66P-201ENST00000365199 138 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 RNU6-715P-201ENST00000365204 103 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 Y_RNA.378-201ENST00000365652 113 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 RNU6-45P-201ENST00000384471 107 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 RNU6-831P-201ENST00000384548 107 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 Y_RNA.535-201ENST00000384612 99 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 RN7SKP123-201ENST00000410732 291 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 MTND3P8-201ENST00000412909 339 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 BMS1P22-201ENST00000414726 313 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 RPL21P90-201ENST00000415692 466 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 AC096649.2-201ENST00000416186 393 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.93□□□□□ -1.94
CLCN3P51790 RPS15AP5-201ENST00000436276 388 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 HMGN2P10-201ENST00000448085 265 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 RPS15AP27-201ENST00000449183 343 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 AL590639.1-201ENST00000456484 337 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 SCARNA18-201ENST00000459004 134 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.93□□□□□ -1.94
CLCN3P51790 RPS29P20-201ENST00000489592 171 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 Y_RNA.654-201ENST00000497848 106 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.93□□□□□ -1.94
CLCN3P51790 RNU6-277P-201ENST00000516272 106 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 Y_RNA.691-201ENST00000516611 103 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 MTND4P7-201ENST00000523876 130 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.93□□□□□ -1.94
CLCN3P51790 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.93□□□□□ -1.94
CLCN3P51790 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.93□□□□□ -1.94
CLCN3P51790 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.93□□□□□ -1.94
CLCN3P51790 AC025281.1-201ENST00000567026 265 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 LRRC37A5P-203ENST00000580181 585 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 MIR4742-201ENST00000581069 85 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 MIR4635-201ENST00000583759 79 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 MIR4298-201ENST00000584380 73 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 AC092807.2-201ENST00000609367 243 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 MIR6817-201ENST00000615588 66 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 MIR6134-201ENST00000617606 109 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 AC243829.7-201ENST00000633081 225 ntBASIC2.93□□□□□ -1.94
CLCN3P51790 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CLCN3P51790 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CLCN3P51790 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.93□□□□□ -1.94
CLCN3P51790 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.93□□□□□ -1.94
CLCN3P51790 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLCN3P51790 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CLCN3P51790 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLCN3P51790 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLCN3P51790 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLCN3P51790 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLCN3P51790 RNA5SP126-201ENST00000365092 109 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 CD24P4-201ENST00000382840 243 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 Y_RNA.474-201ENST00000384341 102 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 RNU6-393P-201ENST00000384475 107 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 RNU6-1179P-201ENST00000384667 107 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.92□□□□□ -1.94
CLCN3P51790 AL512633.1-201ENST00000399931 655 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 RNU6-607P-201ENST00000411283 108 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 ARL5AP1-201ENST00000418991 388 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.92□□□□□ -1.94
CLCN3P51790 AC007560.1-201ENST00000426912 237 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 RPL7P12-201ENST00000446719 750 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.92□□□□□ -1.94
CLCN3P51790 AC007547.1-201ENST00000462177 490 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.92□□□□□ -1.94
CLCN3P51790 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.92□□□□□ -1.94
CLCN3P51790 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.92□□□□□ -1.94
CLCN3P51790 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.92□□□□□ -1.94
CLCN3P51790 SNORA9.3-201ENST00000516383 129 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 RNA5SP148-201ENST00000516527 94 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 SNORD19.2-201ENST00000516978 73 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 AC105029.1-201ENST00000520250 669 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.92□□□□□ -1.94
CLCN3P51790 AC243972.3-201ENST00000539655 198 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.92□□□□□ -1.94
CLCN3P51790 LINC00933-203ENST00000559812 219 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.92□□□□□ -1.94
CLCN3P51790 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.92□□□□□ -1.94
CLCN3P51790 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CLCN3P51790 AC022418.1-201ENST00000624118 445 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.92□□□□□ -1.94
CLCN3P51790 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLCN3P51790 AC099654.7-201ENST00000635788 2127 ntBASIC2.92□□□□□ -1.94
CLCN3P51790 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms