Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 RAP1BP3-201ENST00000407180 549 ntBASIC3.18□□□□□ -1.9
CDK7P50613 RNA5SP508-201ENST00000411327 119 ntBASIC3.18□□□□□ -1.9
CDK7P50613 AC245054.2-201ENST00000415639 319 ntBASIC3.18□□□□□ -1.9
CDK7P50613 NDUFB1P2-201ENST00000449477 176 ntBASIC3.18□□□□□ -1.9
CDK7P50613 AL031274.1-201ENST00000450334 232 ntBASIC3.18□□□□□ -1.9
CDK7P50613 AC092001.1-201ENST00000453012 261 ntBASIC3.18□□□□□ -1.9
CDK7P50613 PPP1R2P5-201ENST00000457256 603 ntBASIC3.18□□□□□ -1.9
CDK7P50613 PMCHL2-203ENST00000457791 237 ntBASIC3.18□□□□□ -1.9
CDK7P50613 AC087884.1-201ENST00000469738 328 ntBASIC3.18□□□□□ -1.9
CDK7P50613 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.18□□□□□ -1.9
CDK7P50613 TRBV12-1-201ENST00000479785 344 ntBASIC3.18□□□□□ -1.9
CDK7P50613 AC011005.2-201ENST00000487324 359 ntBASIC3.18□□□□□ -1.9
CDK7P50613 MTND4LP22-201ENST00000508209 276 ntBASIC3.18□□□□□ -1.9
CDK7P50613 RNU4-49P-201ENST00000516080 140 ntBASIC3.18□□□□□ -1.9
CDK7P50613 RNU6-1332P-201ENST00000516666 104 ntBASIC3.18□□□□□ -1.9
CDK7P50613 RN7SKP256-201ENST00000517201 314 ntBASIC3.18□□□□□ -1.9
CDK7P50613 AC134698.4-201ENST00000523451 826 ntBASIC3.18□□□□□ -1.9
CDK7P50613 AC007536.1-201ENST00000533382 349 ntBASIC3.18□□□□□ -1.9
CDK7P50613 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.18□□□□□ -1.9
CDK7P50613 AC025423.5-201ENST00000550230 219 ntBASIC3.18□□□□□ -1.9
CDK7P50613 AC021739.1-201ENST00000559631 174 ntBASIC3.18□□□□□ -1.9
CDK7P50613 LRRC37A5P-203ENST00000580181 585 ntBASIC3.18□□□□□ -1.9
CDK7P50613 AC008121.1-201ENST00000603244 268 ntBASIC3.18□□□□□ -1.9
CDK7P50613 AC087045.1-201ENST00000605856 382 ntBASIC3.18□□□□□ -1.9
CDK7P50613 AC063943.3-201ENST00000615562 356 ntBASIC3.18□□□□□ -1.9
CDK7P50613 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.18□□□□□ -1.9
CDK7P50613 AC110491.1-201ENST00000562191 2010 ntBASIC3.18□□□□□ -1.9
CDK7P50613 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CDK7P50613 AC093908.1-201ENST00000623125 8092 ntBASIC3.18□□□□□ -1.9
CDK7P50613 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDK7P50613 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDK7P50613 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CDK7P50613 Y_RNA.88-201ENST00000363029 99 ntBASIC3.17□□□□□ -1.9
CDK7P50613 RNU6-1013P-201ENST00000384180 107 ntBASIC3.17□□□□□ -1.9
CDK7P50613 RNU2-3P-201ENST00000410144 191 ntBASIC3.17□□□□□ -1.9
CDK7P50613 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.17□□□□□ -1.9
CDK7P50613 USP9YP20-201ENST00000419224 558 ntBASIC3.17□□□□□ -1.9
CDK7P50613 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.17□□□□□ -1.9
CDK7P50613 NDUFA5P4-201ENST00000436704 385 ntBASIC3.17□□□□□ -1.9
CDK7P50613 MTATP6P23-201ENST00000440153 476 ntBASIC3.17□□□□□ -1.9
CDK7P50613 MTCO2P3-201ENST00000442543 421 ntBASIC3.17□□□□□ -1.9
CDK7P50613 NIPA2P5-201ENST00000452282 464 ntBASIC3.17□□□□□ -1.9
CDK7P50613 AC117503.1-201ENST00000472241 394 ntBASIC3.17□□□□□ -1.9
CDK7P50613 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.17□□□□□ -1.9
CDK7P50613 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.17□□□□□ -1.9
CDK7P50613 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.17□□□□□ -1.9
CDK7P50613 Y_RNA.687-201ENST00000516558 91 ntBASIC3.17□□□□□ -1.9
CDK7P50613 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.17□□□□□ -1.9
CDK7P50613 AC005498.1-201ENST00000592125 465 ntBASIC3.17□□□□□ -1.9
CDK7P50613 BNIP3P25-201ENST00000596023 559 ntBASIC3.17□□□□□ -1.9
CDK7P50613 AC069234.5-201ENST00000611056 416 ntBASIC3.17□□□□□ -1.9
CDK7P50613 DUXAP9-208ENST00000622815 614 ntBASIC3.17□□□□□ -1.9
CDK7P50613 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.17□□□□□ -1.9
CDK7P50613 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDK7P50613 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDK7P50613 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.17□□□□□ -1.9
CDK7P50613 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.16□□□□□ -1.9
CDK7P50613 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDK7P50613 MTND4P12-201ENST00000498999 1377 ntBASIC3.16□□□□□ -1.9
CDK7P50613 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.16□□□□□ -1.9
CDK7P50613 RNU1-112P-201ENST00000364401 164 ntBASIC3.16□□□□□ -1.9
CDK7P50613 Y_RNA.303-201ENST00000364998 94 ntBASIC3.16□□□□□ -1.9
CDK7P50613 RNU6-1027P-201ENST00000383998 107 ntBASIC3.16□□□□□ -1.9
CDK7P50613 Y_RNA.414-201ENST00000384011 101 ntBASIC3.16□□□□□ -1.9
CDK7P50613 RNY3P14-201ENST00000384309 102 ntBASIC3.16□□□□□ -1.9
CDK7P50613 SNORA67.4-201ENST00000384688 142 ntBASIC3.16□□□□□ -1.9
CDK7P50613 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.16□□□□□ -1.9
CDK7P50613 RPL7P10-201ENST00000417407 739 ntBASIC3.16□□□□□ -1.9
CDK7P50613 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.16□□□□□ -1.9
CDK7P50613 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.16□□□□□ -1.9
CDK7P50613 HIGD1AP2-201ENST00000446367 280 ntBASIC3.16□□□□□ -1.9
CDK7P50613 AL513328.1-201ENST00000446460 224 ntBASIC3.16□□□□□ -1.9
CDK7P50613 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.16□□□□□ -1.9
CDK7P50613 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.16□□□□□ -1.9
CDK7P50613 MTCO2P30-201ENST00000503662 364 ntBASIC3.16□□□□□ -1.9
CDK7P50613 YWHAEP4-201ENST00000505390 198 ntBASIC3.16□□□□□ -1.9
CDK7P50613 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDK7P50613 FAM206BP-201ENST00000510179 541 ntBASIC3.16□□□□□ -1.9
CDK7P50613 AC113155.1-201ENST00000511141 769 ntBASIC3.16□□□□□ -1.9
CDK7P50613 RN7SKP43-201ENST00000516173 320 ntBASIC3.16□□□□□ -1.9
CDK7P50613 SNORA20.3-201ENST00000516880 132 ntBASIC3.16□□□□□ -1.9
CDK7P50613 SNORA25.17-201ENST00000517184 124 ntBASIC3.16□□□□□ -1.9
CDK7P50613 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.16□□□□□ -1.9
CDK7P50613 AC087854.1-201ENST00000519706 414 ntBASIC3.16□□□□□ -1.9
CDK7P50613 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.16□□□□□ -1.9
CDK7P50613 MTCO3P23-201ENST00000561363 289 ntBASIC3.16□□□□□ -1.9
CDK7P50613 APOOP1-201ENST00000604695 592 ntBASIC3.16□□□□□ -1.9
CDK7P50613 RMST_4.1-201ENST00000616886 107 ntBASIC3.16□□□□□ -1.9
CDK7P50613 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.15□□□□□ -1.9
CDK7P50613 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDK7P50613 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.15□□□□□ -1.91
CDK7P50613 RNU5E-7P-201ENST00000365290 117 ntBASIC3.15□□□□□ -1.91
CDK7P50613 Z98749.2-208ENST00000381646 500 ntBASIC3.15□□□□□ -1.91
CDK7P50613 RNU6-214P-201ENST00000384130 107 ntBASIC3.15□□□□□ -1.91
CDK7P50613 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CDK7P50613 RNU6-1106P-201ENST00000390845 107 ntBASIC3.15□□□□□ -1.91
CDK7P50613 U3.37-201ENST00000408528 213 ntBASIC3.15□□□□□ -1.91
CDK7P50613 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.15□□□□□ -1.91
CDK7P50613 IFNA20P-201ENST00000436840 528 ntBASIC3.15□□□□□ -1.91
CDK7P50613 AC098831.1-201ENST00000440661 216 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms