Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.68□□□□□ -1.5
PRIM1P49642 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.68□□□□□ -1.5
PRIM1P49642 AC019159.1-201ENST00000605094 187 ntBASIC5.68□□□□□ -1.5
PRIM1P49642 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PRIM1P49642 AC039056.2-201ENST00000622261 511 ntBASIC5.68□□□□□ -1.5
PRIM1P49642 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PRIM1P49642 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PRIM1P49642 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PRIM1P49642 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PRIM1P49642 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PRIM1P49642 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRIM1P49642 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRIM1P49642 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PRIM1P49642 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRIM1P49642 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.67□□□□□ -1.5
PRIM1P49642 AC008568.2-201ENST00000623862 2313 ntBASIC5.67□□□□□ -1.5
PRIM1P49642 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PRIM1P49642 RNU6-199P-201ENST00000362954 107 ntBASIC5.67□□□□□ -1.5
PRIM1P49642 Y_RNA.179-201ENST00000363844 90 ntBASIC5.67□□□□□ -1.5
PRIM1P49642 RPL21P65-201ENST00000406094 466 ntBASIC5.67□□□□□ -1.5
PRIM1P49642 AL157831.1-201ENST00000426134 473 ntBASIC5.67□□□□□ -1.5
PRIM1P49642 AC010095.1-201ENST00000443543 144 ntBASIC5.67□□□□□ -1.5
PRIM1P49642 IFNA11P-201ENST00000446352 526 ntBASIC5.67□□□□□ -1.5
PRIM1P49642 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.67□□□□□ -1.5
PRIM1P49642 AC091874.1-201ENST00000511402 339 ntBASIC5.67□□□□□ -1.5
PRIM1P49642 RNU6-155P-201ENST00000516347 100 ntBASIC5.67□□□□□ -1.5
PRIM1P49642 AC090281.1-201ENST00000523019 276 ntBASIC5.67□□□□□ -1.5
PRIM1P49642 CYCSP39-201ENST00000565821 309 ntBASIC5.67□□□□□ -1.5
PRIM1P49642 MIR4744-201ENST00000581563 82 ntBASIC5.67□□□□□ -1.5
PRIM1P49642 AL356575.1-201ENST00000603008 283 ntBASIC5.67□□□□□ -1.5
PRIM1P49642 AC136601.2-201ENST00000604356 474 ntBASIC5.67□□□□□ -1.5
PRIM1P49642 DHX9P1-201ENST00000436565 3076 ntBASIC5.67□□□□□ -1.5
PRIM1P49642 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRIM1P49642 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.67□□□□□ -1.5
PRIM1P49642 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PRIM1P49642 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRIM1P49642 MTND5P35-201ENST00000557537 1720 ntBASIC5.66□□□□□ -1.5
PRIM1P49642 AC026523.2-201ENST00000625039 7739 ntBASIC5.66□□□□□ -1.5
PRIM1P49642 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.66□□□□□ -1.5
PRIM1P49642 RNU6-873P-201ENST00000363833 107 ntBASIC5.66□□□□□ -1.5
PRIM1P49642 Y_RNA.337-201ENST00000365312 102 ntBASIC5.66□□□□□ -1.5
PRIM1P49642 RNU6-245P-201ENST00000384020 107 ntBASIC5.66□□□□□ -1.5
PRIM1P49642 RNU2-54P-201ENST00000410299 190 ntBASIC5.66□□□□□ -1.5
PRIM1P49642 AL160275.2-201ENST00000412010 394 ntBASIC5.66□□□□□ -1.5
PRIM1P49642 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC5.66□□□□□ -1.5
PRIM1P49642 RPS26P2-201ENST00000440331 348 ntBASIC5.66□□□□□ -1.5
PRIM1P49642 AC009237.8-201ENST00000445492 379 ntBASIC5.66□□□□□ -1.5
PRIM1P49642 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PRIM1P49642 RNU6-1183P-201ENST00000517054 60 ntBASIC5.66□□□□□ -1.5
PRIM1P49642 HSPE1P4-201ENST00000550617 308 ntBASIC5.66□□□□□ -1.5
PRIM1P49642 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.66□□□□□ -1.5
PRIM1P49642 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.66□□□□□ -1.5
PRIM1P49642 AC015912.2-201ENST00000571053 181 ntBASIC5.66□□□□□ -1.5
PRIM1P49642 AC006380.1-201ENST00000603598 186 ntBASIC5.66□□□□□ -1.5
PRIM1P49642 AC004825.2-201ENST00000616634 455 ntBASIC5.66□□□□□ -1.5
PRIM1P49642 AC005086.4-201ENST00000623065 213 ntBASIC5.66□□□□□ -1.5
PRIM1P49642 AC099654.7-201ENST00000635788 2127 ntBASIC5.66□□□□□ -1.5
PRIM1P49642 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRIM1P49642 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRIM1P49642 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PRIM1P49642 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PRIM1P49642 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PRIM1P49642 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PRIM1P49642 RNU1-14P-201ENST00000362759 152 ntBASIC5.65□□□□□ -1.5
PRIM1P49642 RNU6-942P-201ENST00000363002 107 ntBASIC5.65□□□□□ -1.5
PRIM1P49642 RNU4-11P-201ENST00000365287 132 ntBASIC5.65□□□□□ -1.5
PRIM1P49642 RNU6-381P-201ENST00000391259 108 ntBASIC5.65□□□□□ -1.5
PRIM1P49642 AL357075.1-201ENST00000404107 726 ntBASIC5.65□□□□□ -1.5
PRIM1P49642 MIR320B2-201ENST00000408479 138 ntBASIC5.65□□□□□ -1.5
PRIM1P49642 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.65□□□□□ -1.5
PRIM1P49642 RAB28P5-201ENST00000427490 651 ntBASIC5.65□□□□□ -1.5
PRIM1P49642 GOT2P5-201ENST00000433995 546 ntBASIC5.65□□□□□ -1.5
PRIM1P49642 RPS15AP5-201ENST00000436276 388 ntBASIC5.65□□□□□ -1.5
PRIM1P49642 AC099522.1-202ENST00000514718 367 ntBASIC5.65□□□□□ -1.5
PRIM1P49642 SNORA25.12-201ENST00000516202 82 ntBASIC5.65□□□□□ -1.5
PRIM1P49642 AC100767.1-201ENST00000528178 123 ntBASIC5.65□□□□□ -1.5
PRIM1P49642 CR383656.8-201ENST00000549046 145 ntBASIC5.65□□□□□ -1.5
PRIM1P49642 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PRIM1P49642 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PRIM1P49642 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PRIM1P49642 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PRIM1P49642 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
PRIM1P49642 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PRIM1P49642 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.64□□□□□ -1.51
PRIM1P49642 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
PRIM1P49642 RNU6-578P-201ENST00000390980 103 ntBASIC5.64□□□□□ -1.51
PRIM1P49642 RPS20P14-201ENST00000412545 360 ntBASIC5.64□□□□□ -1.51
PRIM1P49642 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.64□□□□□ -1.51
PRIM1P49642 AC244098.2-201ENST00000422068 99 ntBASIC5.64□□□□□ -1.51
PRIM1P49642 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.64□□□□□ -1.51
PRIM1P49642 RPL23AP14-201ENST00000468281 468 ntBASIC5.64□□□□□ -1.51
PRIM1P49642 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.64□□□□□ -1.51
PRIM1P49642 RN7SKP179-201ENST00000516126 217 ntBASIC5.64□□□□□ -1.51
PRIM1P49642 Y_RNA.686-201ENST00000516548 134 ntBASIC5.64□□□□□ -1.51
PRIM1P49642 AL357075.2-201ENST00000614906 189 ntBASIC5.64□□□□□ -1.51
PRIM1P49642 AC004467.1-201ENST00000615678 330 ntBASIC5.64□□□□□ -1.51
PRIM1P49642 AC006065.5-201ENST00000623427 349 ntBASIC5.64□□□□□ -1.51
PRIM1P49642 AL133243.3-201ENST00000617415 3004 ntBASIC5.64□□□□□ -1.51
PRIM1P49642 MARK2P15-201ENST00000432204 2186 ntBASIC5.64□□□□□ -1.51
PRIM1P49642 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms