Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RNU6-805P-201ENST00000365643 106 ntBASIC2.95□□□□□ -1.94
SOX2P48431 RNU6-198P-201ENST00000384258 104 ntBASIC2.95□□□□□ -1.94
SOX2P48431 RNU6-692P-201ENST00000384496 107 ntBASIC2.95□□□□□ -1.94
SOX2P48431 SNORA41-201ENST00000384675 132 ntBASIC2.95□□□□□ -1.94
SOX2P48431 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SOX2P48431 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.95□□□□□ -1.94
SOX2P48431 AL035423.1-201ENST00000420331 213 ntBASIC2.95□□□□□ -1.94
SOX2P48431 AC005300.1-201ENST00000428401 373 ntBASIC2.95□□□□□ -1.94
SOX2P48431 AC004975.1-201ENST00000428733 208 ntBASIC2.95□□□□□ -1.94
SOX2P48431 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.95□□□□□ -1.94
SOX2P48431 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.95□□□□□ -1.94
SOX2P48431 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.95□□□□□ -1.94
SOX2P48431 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.95□□□□□ -1.94
SOX2P48431 AC022493.2-201ENST00000506122 481 ntBASIC2.95□□□□□ -1.94
SOX2P48431 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.95□□□□□ -1.94
SOX2P48431 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.95□□□□□ -1.94
SOX2P48431 RNU6-988P-201ENST00000519081 107 ntBASIC2.95□□□□□ -1.94
SOX2P48431 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.95□□□□□ -1.94
SOX2P48431 AC021739.1-201ENST00000559631 174 ntBASIC2.95□□□□□ -1.94
SOX2P48431 VN1R107P-201ENST00000601784 209 ntBASIC2.95□□□□□ -1.94
SOX2P48431 MIR8076-201ENST00000611401 83 ntBASIC2.95□□□□□ -1.94
SOX2P48431 AC090617.7-201ENST00000623952 126 ntBASIC2.95□□□□□ -1.94
SOX2P48431 MIR3199-2-201ENST00000636243 86 ntBASIC2.95□□□□□ -1.94
SOX2P48431 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SOX2P48431 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.95□□□□□ -1.94
SOX2P48431 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.95□□□□□ -1.94
SOX2P48431 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.95□□□□□ -1.94
SOX2P48431 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SOX2P48431 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SOX2P48431 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SOX2P48431 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SOX2P48431 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.94□□□□□ -1.94
SOX2P48431 Y_RNA.31-201ENST00000362574 102 ntBASIC2.94□□□□□ -1.94
SOX2P48431 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.94□□□□□ -1.94
SOX2P48431 Y_RNA.422-201ENST00000384054 114 ntBASIC2.94□□□□□ -1.94
SOX2P48431 Y_RNA.463-201ENST00000384271 102 ntBASIC2.94□□□□□ -1.94
SOX2P48431 RNU6-308P-201ENST00000390957 107 ntBASIC2.94□□□□□ -1.94
SOX2P48431 AL591034.2-201ENST00000402839 359 ntBASIC2.94□□□□□ -1.94
SOX2P48431 AC096664.2-201ENST00000411843 406 ntBASIC2.94□□□□□ -1.94
SOX2P48431 BX276092.3-201ENST00000424182 230 ntBASIC2.94□□□□□ -1.94
SOX2P48431 RPL21P40-201ENST00000428586 483 ntBASIC2.94□□□□□ -1.94
SOX2P48431 MTND3P9-201ENST00000429526 346 ntBASIC2.94□□□□□ -1.94
SOX2P48431 AL591043.1-201ENST00000432461 424 ntBASIC2.94□□□□□ -1.94
SOX2P48431 AL714022.1-201ENST00000439897 151 ntBASIC2.94□□□□□ -1.94
SOX2P48431 AC011816.1-201ENST00000441346 546 ntBASIC2.94□□□□□ -1.94
SOX2P48431 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.94□□□□□ -1.94
SOX2P48431 NUTF2P7-201ENST00000453086 375 ntBASIC2.94□□□□□ -1.94
SOX2P48431 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.94□□□□□ -1.94
SOX2P48431 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.94□□□□□ -1.94
SOX2P48431 PHBP14-201ENST00000512887 367 ntBASIC2.94□□□□□ -1.94
SOX2P48431 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.94□□□□□ -1.94
SOX2P48431 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.94□□□□□ -1.94
SOX2P48431 AC136624.4-201ENST00000573044 370 ntBASIC2.94□□□□□ -1.94
SOX2P48431 MTCO3P13-201ENST00000577757 781 ntBASIC2.94□□□□□ -1.94
SOX2P48431 AC006504.6-201ENST00000590142 199 ntBASIC2.94□□□□□ -1.94
SOX2P48431 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.94□□□□□ -1.94
SOX2P48431 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.94□□□□□ -1.94
SOX2P48431 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.94□□□□□ -1.94
SOX2P48431 AL020997.2-201ENST00000602607 184 ntBASIC2.94□□□□□ -1.94
SOX2P48431 AC024220.1-201ENST00000603675 484 ntBASIC2.94□□□□□ -1.94
SOX2P48431 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.94□□□□□ -1.94
SOX2P48431 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.94□□□□□ -1.94
SOX2P48431 MTND5P30-201ENST00000452896 1731 ntBASIC2.93□□□□□ -1.94
SOX2P48431 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SOX2P48431 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SOX2P48431 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SOX2P48431 Y_RNA.5-201ENST00000362334 102 ntBASIC2.93□□□□□ -1.94
SOX2P48431 RNU6-858P-201ENST00000362436 107 ntBASIC2.93□□□□□ -1.94
SOX2P48431 Y_RNA.28-201ENST00000362554 111 ntBASIC2.93□□□□□ -1.94
SOX2P48431 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.93□□□□□ -1.94
SOX2P48431 SNORA22B-201ENST00000383876 138 ntBASIC2.93□□□□□ -1.94
SOX2P48431 SNORD116-20-201ENST00000384529 92 ntBASIC2.93□□□□□ -1.94
SOX2P48431 SAR1AP2-201ENST00000392696 594 ntBASIC2.93□□□□□ -1.94
SOX2P48431 RNU6-1077P-201ENST00000410506 102 ntBASIC2.93□□□□□ -1.94
SOX2P48431 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.93□□□□□ -1.94
SOX2P48431 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.93□□□□□ -1.94
SOX2P48431 PMCHL1-202ENST00000423102 261 ntBASIC2.93□□□□□ -1.94
SOX2P48431 AL035666.1-201ENST00000446195 348 ntBASIC2.93□□□□□ -1.94
SOX2P48431 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.93□□□□□ -1.94
SOX2P48431 NIPA2P5-201ENST00000452282 464 ntBASIC2.93□□□□□ -1.94
SOX2P48431 RNU7-23P-201ENST00000459465 62 ntBASIC2.93□□□□□ -1.94
SOX2P48431 RPS27P29-201ENST00000463110 252 ntBASIC2.93□□□□□ -1.94
SOX2P48431 AC068781.1-201ENST00000488231 618 ntBASIC2.93□□□□□ -1.94
SOX2P48431 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
SOX2P48431 AC116655.1-201ENST00000508324 901 ntBASIC2.93□□□□□ -1.94
SOX2P48431 SNORA31.1-201ENST00000515993 133 ntBASIC2.93□□□□□ -1.94
SOX2P48431 Y_RNA.661-201ENST00000516003 99 ntBASIC2.93□□□□□ -1.94
SOX2P48431 SNORA31.5-201ENST00000516190 133 ntBASIC2.93□□□□□ -1.94
SOX2P48431 RNU6-581P-201ENST00000516214 105 ntBASIC2.93□□□□□ -1.94
SOX2P48431 SNORA31.18-201ENST00000517043 134 ntBASIC2.93□□□□□ -1.94
SOX2P48431 RNU6-711P-201ENST00000517255 106 ntBASIC2.93□□□□□ -1.94
SOX2P48431 AC006199.1-201ENST00000548728 219 ntBASIC2.93□□□□□ -1.94
SOX2P48431 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.93□□□□□ -1.94
SOX2P48431 BNIP3P16-201ENST00000589779 534 ntBASIC2.93□□□□□ -1.94
SOX2P48431 AC006557.5-201ENST00000603126 811 ntBASIC2.93□□□□□ -1.94
SOX2P48431 AC016925.2-201ENST00000605108 242 ntBASIC2.93□□□□□ -1.94
SOX2P48431 AC040896.1-201ENST00000613819 479 ntBASIC2.93□□□□□ -1.94
SOX2P48431 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.93□□□□□ -1.94
SOX2P48431 MIR6810-201ENST00000622701 70 ntBASIC2.93□□□□□ -1.94
SOX2P48431 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms