Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 MIR8081-201ENST00000611533 95 ntBASIC0.98□□□□□ -2.25
RPL28P46779 MIR8074-201ENST00000615081 81 ntBASIC0.98□□□□□ -2.25
RPL28P46779 AC106858.1-201ENST00000637497 429 ntBASIC0.98□□□□□ -2.25
RPL28P46779 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.97□□□□□ -2.25
RPL28P46779 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.97□□□□□ -2.25
RPL28P46779 SNORD3E-201ENST00000362899 217 ntBASIC0.97□□□□□ -2.25
RPL28P46779 RNU5E-10P-201ENST00000363506 118 ntBASIC0.97□□□□□ -2.25
RPL28P46779 RNU6-960P-201ENST00000364056 120 ntBASIC0.97□□□□□ -2.25
RPL28P46779 RNU6-190P-201ENST00000384154 102 ntBASIC0.97□□□□□ -2.25
RPL28P46779 MIR504-201ENST00000385065 83 ntBASIC0.97□□□□□ -2.25
RPL28P46779 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
RPL28P46779 SNORA67.6-201ENST00000391093 99 ntBASIC0.97□□□□□ -2.25
RPL28P46779 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.97□□□□□ -2.25
RPL28P46779 CALM1P1-201ENST00000442082 433 ntBASIC0.97□□□□□ -2.25
RPL28P46779 AC118469.1-201ENST00000442943 488 ntBASIC0.97□□□□□ -2.25
RPL28P46779 AC010095.1-201ENST00000443543 144 ntBASIC0.97□□□□□ -2.25
RPL28P46779 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.97□□□□□ -2.25
RPL28P46779 snoU109.2-201ENST00000459316 135 ntBASIC0.97□□□□□ -2.25
RPL28P46779 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.97□□□□□ -2.25
RPL28P46779 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.97□□□□□ -2.25
RPL28P46779 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.97□□□□□ -2.25
RPL28P46779 AC023050.2-201ENST00000544968 387 ntBASIC0.97□□□□□ -2.25
RPL28P46779 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.97□□□□□ -2.25
RPL28P46779 AC008269.2-201ENST00000561915 1105 ntBASIC0.97□□□□□ -2.25
RPL28P46779 AC023813.2-201ENST00000564321 469 ntBASIC0.97□□□□□ -2.25
RPL28P46779 MIR3683-201ENST00000580847 82 ntBASIC0.97□□□□□ -2.25
RPL28P46779 MIR4422-201ENST00000581938 83 ntBASIC0.97□□□□□ -2.25
RPL28P46779 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.97□□□□□ -2.25
RPL28P46779 AL391001.1-201ENST00000602747 715 ntBASIC0.97□□□□□ -2.25
RPL28P46779 AC078795.2-201ENST00000602835 1252 ntBASIC0.97□□□□□ -2.25
RPL28P46779 AL138889.2-201ENST00000603883 242 ntBASIC0.97□□□□□ -2.25
RPL28P46779 AL355816.2-201ENST00000610049 647 ntBASIC0.97□□□□□ -2.25
RPL28P46779 AC107308.1-201ENST00000615897 301 ntBASIC0.97□□□□□ -2.25
RPL28P46779 AL159153.1-201ENST00000619688 317 ntBASIC0.97□□□□□ -2.25
RPL28P46779 AC024940.5-201ENST00000622889 474 ntBASIC0.97□□□□□ -2.25
RPL28P46779 MIR1248-201ENST00000629190 106 ntBASIC0.97□□□□□ -2.25
RPL28P46779 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
RPL28P46779 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.96□□□□□ -2.26
RPL28P46779 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
RPL28P46779 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC0.96□□□□□ -2.26
RPL28P46779 Y_RNA.46-201ENST00000362695 102 ntBASIC0.96□□□□□ -2.26
RPL28P46779 RNY4P24-201ENST00000362735 96 ntBASIC0.96□□□□□ -2.26
RPL28P46779 SNORD14B-201ENST00000364533 90 ntBASIC0.96□□□□□ -2.26
RPL28P46779 SNORD116-20-201ENST00000384529 92 ntBASIC0.96□□□□□ -2.26
RPL28P46779 SNORA67.5-201ENST00000391036 107 ntBASIC0.96□□□□□ -2.26
RPL28P46779 RNU1-78P-201ENST00000391248 165 ntBASIC0.96□□□□□ -2.26
RPL28P46779 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.96□□□□□ -2.26
RPL28P46779 AL008629.1-201ENST00000438615 184 ntBASIC0.96□□□□□ -2.26
RPL28P46779 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.96□□□□□ -2.26
RPL28P46779 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.96□□□□□ -2.26
RPL28P46779 AL590365.1-201ENST00000450788 243 ntBASIC0.96□□□□□ -2.26
RPL28P46779 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.96□□□□□ -2.26
RPL28P46779 RPS29P23-201ENST00000458635 123 ntBASIC0.96□□□□□ -2.26
RPL28P46779 AC104982.1-201ENST00000478775 574 ntBASIC0.96□□□□□ -2.26
RPL28P46779 AC010409.1-201ENST00000487382 476 ntBASIC0.96□□□□□ -2.26
RPL28P46779 AC098862.1-201ENST00000504991 413 ntBASIC0.96□□□□□ -2.26
RPL28P46779 RNA5SP61-201ENST00000516453 100 ntBASIC0.96□□□□□ -2.26
RPL28P46779 Y_RNA.689-201ENST00000516589 107 ntBASIC0.96□□□□□ -2.26
RPL28P46779 SNORA31.17-201ENST00000516953 127 ntBASIC0.96□□□□□ -2.26
RPL28P46779 SNORA31.24-201ENST00000517232 57 ntBASIC0.96□□□□□ -2.26
RPL28P46779 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.96□□□□□ -2.26
RPL28P46779 AP003122.4-201ENST00000530980 758 ntBASIC0.96□□□□□ -2.26
RPL28P46779 AP003034.1-201ENST00000534621 422 ntBASIC0.96□□□□□ -2.26
RPL28P46779 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.96□□□□□ -2.26
RPL28P46779 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
RPL28P46779 MIR3169-201ENST00000578032 83 ntBASIC0.96□□□□□ -2.26
RPL28P46779 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
RPL28P46779 AC080013.3-201ENST00000606839 578 ntBASIC0.96□□□□□ -2.26
RPL28P46779 AC144521.1-201ENST00000607148 956 ntBASIC0.96□□□□□ -2.26
RPL28P46779 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.96□□□□□ -2.26
RPL28P46779 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
RPL28P46779 snoU2_19.1-201ENST00000362361 80 ntBASIC0.95□□□□□ -2.26
RPL28P46779 Y_RNA.67-201ENST00000362870 100 ntBASIC0.95□□□□□ -2.26
RPL28P46779 RNU6-23P-201ENST00000363283 107 ntBASIC0.95□□□□□ -2.26
RPL28P46779 RNA5SP493-201ENST00000364115 91 ntBASIC0.95□□□□□ -2.26
RPL28P46779 RNU6-743P-201ENST00000364151 106 ntBASIC0.95□□□□□ -2.26
RPL28P46779 RNA5SP190-201ENST00000365222 118 ntBASIC0.95□□□□□ -2.26
RPL28P46779 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
RPL28P46779 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
RPL28P46779 SNORD26-201ENST00000384147 75 ntBASIC0.95□□□□□ -2.26
RPL28P46779 MIR150-201ENST00000385048 84 ntBASIC0.95□□□□□ -2.26
RPL28P46779 RNU6-1000P-201ENST00000391066 106 ntBASIC0.95□□□□□ -2.26
RPL28P46779 RNU4-22P-201ENST00000411058 166 ntBASIC0.95□□□□□ -2.26
RPL28P46779 RPL30P13-201ENST00000418873 348 ntBASIC0.95□□□□□ -2.26
RPL28P46779 SDAD1P3-201ENST00000427380 333 ntBASIC0.95□□□□□ -2.26
RPL28P46779 TOMM20P4-201ENST00000427861 435 ntBASIC0.95□□□□□ -2.26
RPL28P46779 CBX3P6-201ENST00000430257 527 ntBASIC0.95□□□□□ -2.26
RPL28P46779 RPS15AP10-201ENST00000432472 382 ntBASIC0.95□□□□□ -2.26
RPL28P46779 AC015922.2-201ENST00000435593 184 ntBASIC0.95□□□□□ -2.26
RPL28P46779 AL121601.2-201ENST00000438019 707 ntBASIC0.95□□□□□ -2.26
RPL28P46779 MTCO1P44-201ENST00000441935 243 ntBASIC0.95□□□□□ -2.26
RPL28P46779 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.95□□□□□ -2.26
RPL28P46779 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.95□□□□□ -2.26
RPL28P46779 AMD1P1-201ENST00000457220 922 ntBASIC0.95□□□□□ -2.26
RPL28P46779 AC025465.3-201ENST00000510570 311 ntBASIC0.95□□□□□ -2.26
RPL28P46779 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.95□□□□□ -2.26
RPL28P46779 AC112206.3-201ENST00000514578 389 ntBASIC0.95□□□□□ -2.26
RPL28P46779 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.95□□□□□ -2.26
RPL28P46779 AL356057.1-201ENST00000533798 831 ntBASIC0.95□□□□□ -2.26
RPL28P46779 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms