Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RPL29P14-201ENST00000495837 428 ntBASIC4.04□□□□□ -1.76
CCNFP41002 HMGB3P17-201ENST00000504195 649 ntBASIC4.04□□□□□ -1.76
CCNFP41002 AC006445.2-201ENST00000510061 472 ntBASIC4.04□□□□□ -1.76
CCNFP41002 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.04□□□□□ -1.76
CCNFP41002 MIR3939-201ENST00000582614 106 ntBASIC4.04□□□□□ -1.76
CCNFP41002 MIR3609-201ENST00000582661 80 ntBASIC4.04□□□□□ -1.76
CCNFP41002 MIR5684-201ENST00000585074 65 ntBASIC4.04□□□□□ -1.76
CCNFP41002 AC002076.2-201ENST00000617362 122 ntBASIC4.04□□□□□ -1.76
CCNFP41002 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.04□□□□□ -1.76
CCNFP41002 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCNFP41002 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCNFP41002 AL353746.1-201ENST00000566293 6881 ntBASIC4.04□□□□□ -1.76
CCNFP41002 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCNFP41002 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCNFP41002 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCNFP41002 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCNFP41002 RNU6-942P-201ENST00000363002 107 ntBASIC4.03□□□□□ -1.76
CCNFP41002 RNU1-18P-201ENST00000363062 164 ntBASIC4.03□□□□□ -1.76
CCNFP41002 MIR215-201ENST00000384858 110 ntBASIC4.03□□□□□ -1.76
CCNFP41002 MIR32-201ENST00000384965 70 ntBASIC4.03□□□□□ -1.76
CCNFP41002 HMGN2P8-201ENST00000391458 268 ntBASIC4.03□□□□□ -1.76
CCNFP41002 RAB9AP3-201ENST00000412737 573 ntBASIC4.03□□□□□ -1.76
CCNFP41002 AL358453.1-201ENST00000422522 250 ntBASIC4.03□□□□□ -1.76
CCNFP41002 AC243964.1-201ENST00000441814 261 ntBASIC4.03□□□□□ -1.76
CCNFP41002 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.03□□□□□ -1.76
CCNFP41002 AL590664.1-201ENST00000448065 339 ntBASIC4.03□□□□□ -1.76
CCNFP41002 RAB9AP1-201ENST00000449393 573 ntBASIC4.03□□□□□ -1.76
CCNFP41002 RPL23AP75-201ENST00000491601 451 ntBASIC4.03□□□□□ -1.76
CCNFP41002 AC091874.1-201ENST00000511402 339 ntBASIC4.03□□□□□ -1.76
CCNFP41002 MTND1P19-201ENST00000511780 315 ntBASIC4.03□□□□□ -1.76
CCNFP41002 AC067942.3-201ENST00000512025 362 ntBASIC4.03□□□□□ -1.76
CCNFP41002 RN7SKP122-201ENST00000515923 296 ntBASIC4.03□□□□□ -1.76
CCNFP41002 IGKV2-23-201ENST00000518729 323 ntBASIC4.03□□□□□ -1.76
CCNFP41002 MRPL49P2-201ENST00000521066 465 ntBASIC4.03□□□□□ -1.76
CCNFP41002 AC012468.1-201ENST00000604888 430 ntBASIC4.03□□□□□ -1.76
CCNFP41002 AC023043.4-201ENST00000612081 449 ntBASIC4.03□□□□□ -1.76
CCNFP41002 AC024581.2-201ENST00000619986 252 ntBASIC4.03□□□□□ -1.76
CCNFP41002 MIR6830-201ENST00000636015 70 ntBASIC4.03□□□□□ -1.76
CCNFP41002 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.03□□□□□ -1.76
CCNFP41002 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
CCNFP41002 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CCNFP41002 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.02□□□□□ -1.77
CCNFP41002 Y_RNA.143-201ENST00000363520 106 ntBASIC4.02□□□□□ -1.77
CCNFP41002 RNU6-1280P-201ENST00000365211 107 ntBASIC4.02□□□□□ -1.77
CCNFP41002 RNU6-1026P-201ENST00000384465 108 ntBASIC4.02□□□□□ -1.77
CCNFP41002 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCNFP41002 RNU6-1093P-201ENST00000391194 107 ntBASIC4.02□□□□□ -1.77
CCNFP41002 RPS26P8-201ENST00000393490 348 ntBASIC4.02□□□□□ -1.77
CCNFP41002 UBA52P6-201ENST00000399822 382 ntBASIC4.02□□□□□ -1.77
CCNFP41002 RNU2-25P-201ENST00000411041 191 ntBASIC4.02□□□□□ -1.77
CCNFP41002 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.02□□□□□ -1.77
CCNFP41002 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.02□□□□□ -1.77
CCNFP41002 AL031659.1-201ENST00000447075 539 ntBASIC4.02□□□□□ -1.77
CCNFP41002 AL500522.2-201ENST00000448562 343 ntBASIC4.02□□□□□ -1.77
CCNFP41002 AC012308.1-201ENST00000451232 178 ntBASIC4.02□□□□□ -1.77
CCNFP41002 RN7SL93P-201ENST00000463035 293 ntBASIC4.02□□□□□ -1.77
CCNFP41002 RPL32P34-201ENST00000486380 400 ntBASIC4.02□□□□□ -1.77
CCNFP41002 AC020593.1-201ENST00000507399 299 ntBASIC4.02□□□□□ -1.77
CCNFP41002 RNU6-1023P-201ENST00000516137 106 ntBASIC4.02□□□□□ -1.77
CCNFP41002 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.02□□□□□ -1.77
CCNFP41002 CYCSP29-201ENST00000533731 318 ntBASIC4.02□□□□□ -1.77
CCNFP41002 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.02□□□□□ -1.77
CCNFP41002 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.02□□□□□ -1.77
CCNFP41002 AC010928.2-201ENST00000588017 287 ntBASIC4.02□□□□□ -1.77
CCNFP41002 AC012433.1-201ENST00000588916 398 ntBASIC4.02□□□□□ -1.77
CCNFP41002 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.02□□□□□ -1.77
CCNFP41002 AC011476.5-201ENST00000615594 130 ntBASIC4.02□□□□□ -1.77
CCNFP41002 MIR376A1-201ENST00000616574 68 ntBASIC4.02□□□□□ -1.77
CCNFP41002 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CCNFP41002 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.02□□□□□ -1.77
CCNFP41002 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCNFP41002 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
CCNFP41002 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCNFP41002 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCNFP41002 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.01□□□□□ -1.77
CCNFP41002 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCNFP41002 SNORD35B-201ENST00000363660 87 ntBASIC4.01□□□□□ -1.77
CCNFP41002 SNORD27-201ENST00000363981 72 ntBASIC4.01□□□□□ -1.77
CCNFP41002 Y_RNA.515-201ENST00000384535 112 ntBASIC4.01□□□□□ -1.77
CCNFP41002 SNORA70C-201ENST00000384538 135 ntBASIC4.01□□□□□ -1.77
CCNFP41002 RNU2-20P-201ENST00000410425 191 ntBASIC4.01□□□□□ -1.77
CCNFP41002 RN7SKP27-201ENST00000410684 333 ntBASIC4.01□□□□□ -1.77
CCNFP41002 NDUFS5P4-201ENST00000412983 318 ntBASIC4.01□□□□□ -1.77
CCNFP41002 AC096920.1-201ENST00000423991 241 ntBASIC4.01□□□□□ -1.77
CCNFP41002 RPL26P9-201ENST00000457466 433 ntBASIC4.01□□□□□ -1.77
CCNFP41002 PPIAP15-201ENST00000479662 484 ntBASIC4.01□□□□□ -1.77
CCNFP41002 RPL30P14-201ENST00000482744 348 ntBASIC4.01□□□□□ -1.77
CCNFP41002 RPL30P1-201ENST00000488676 339 ntBASIC4.01□□□□□ -1.77
CCNFP41002 AC026726.1-201ENST00000512859 601 ntBASIC4.01□□□□□ -1.77
CCNFP41002 RNU6-581P-201ENST00000516214 105 ntBASIC4.01□□□□□ -1.77
CCNFP41002 SNORA31.9-201ENST00000516429 84 ntBASIC4.01□□□□□ -1.77
CCNFP41002 AP002770.2-201ENST00000543613 532 ntBASIC4.01□□□□□ -1.77
CCNFP41002 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.01□□□□□ -1.77
CCNFP41002 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.01□□□□□ -1.77
CCNFP41002 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.01□□□□□ -1.77
CCNFP41002 AC090617.3-201ENST00000573670 475 ntBASIC4.01□□□□□ -1.77
CCNFP41002 MIR4644-201ENST00000579929 84 ntBASIC4.01□□□□□ -1.77
CCNFP41002 AL451007.1-201ENST00000595491 289 ntBASIC4.01□□□□□ -1.77
CCNFP41002 uc_338.32-201ENST00000615087 172 ntBASIC4.01□□□□□ -1.77
CCNFP41002 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms