Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 RNU1-107P-201ENST00000516617 154 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 SNORA70.19-201ENST00000516717 90 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 AC009902.1-201ENST00000519351 183 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 AC087854.1-201ENST00000519706 414 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 AP006245.1-201ENST00000522549 120 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 COPS8P3-201ENST00000526024 482 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXD12P35452 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXD12P35452 H3F3AP1-201ENST00000559984 334 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.25□□□□□ -1.89
HOXD12P35452 LRRC37A5P-203ENST00000580181 585 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXD12P35452 AC019159.1-201ENST00000605094 187 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 AC090574.1-201ENST00000623186 233 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXD12P35452 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.25□□□□□ -1.89
HOXD12P35452 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXD12P35452 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXD12P35452 AC017071.1-201ENST00000564407 2204 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
HOXD12P35452 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
HOXD12P35452 SNORD3E-201ENST00000362899 217 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 RNA5SP197-201ENST00000363357 119 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 RNU4-76P-201ENST00000364509 141 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 Y_RNA.339-201ENST00000365325 102 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HOXD12P35452 MIR887-201ENST00000401258 79 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.24□□□□□ -1.89
HOXD12P35452 AL139396.1-201ENST00000421137 167 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXD12P35452 RPS15AP5-201ENST00000436276 388 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXD12P35452 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXD12P35452 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXD12P35452 Y_RNA.632-201ENST00000459189 102 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXD12P35452 AC008526.1-201ENST00000509149 338 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXD12P35452 RN7SKP24-201ENST00000515888 284 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 RNU6-56P-201ENST00000516986 93 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 AC069113.1-201ENST00000517763 267 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 AC026241.1-201ENST00000517873 2142 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXD12P35452 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXD12P35452 AC005476.1-201ENST00000554427 397 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXD12P35452 AC007151.1-201ENST00000572774 483 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 POLR3GP2-201ENST00000588366 668 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 RPL12P50-201ENST00000603116 116 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 AL355598.1-201ENST00000604169 202 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 AC016727.1-205ENST00000605437 569 ntBASIC3.24□□□□□ -1.89
HOXD12P35452 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXD12P35452 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXD12P35452 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD12P35452 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD12P35452 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD12P35452 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD12P35452 MIR412-201ENST00000362142 91 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 RNU6-562P-201ENST00000362731 107 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 Y_RNA.324-201ENST00000365165 102 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD12P35452 SNORA7.4-201ENST00000384249 137 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 Y_RNA.460-201ENST00000384255 102 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 RPL21P3-201ENST00000395517 478 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 RPL37P10-201ENST00000412884 288 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 Z99755.1-201ENST00000414048 380 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 RPL26P27-201ENST00000414397 437 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXD12P35452 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD12P35452 MYL8P-204ENST00000431574 518 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 RPL21P2-201ENST00000440049 481 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXD12P35452 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXD12P35452 Y_RNA.635-201ENST00000459041 101 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 AC146507.2-201ENST00000460608 476 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 AC128713.1-201ENST00000471495 306 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 RPS27P27-201ENST00000498779 255 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 MIR892C-201ENST00000516410 77 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 AP005639.2-201ENST00000527592 928 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 AC025423.5-201ENST00000550230 219 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXD12P35452 MIR4672-201ENST00000583126 81 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 AC006023.1-201ENST00000603944 259 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 AL162713.1-201ENST00000604480 262 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 APOOP1-201ENST00000604695 592 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 AL353621.2-201ENST00000605340 133 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 RNU6-85P-201ENST00000605989 107 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 AL050343.2-201ENST00000607338 280 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD12P35452 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXD12P35452 AC018692.3-201ENST00000623929 123 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 MIR622-201ENST00000638396 96 ntBASIC3.23□□□□□ -1.89
HOXD12P35452 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD12P35452 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD12P35452 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HOXD12P35452 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXD12P35452 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXD12P35452 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXD12P35452 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms