Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC000111.3-201ENST00000433478 193 ntBASIC2.88□□□□□ -1.95
TM4SF1P30408 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.88□□□□□ -1.95
TM4SF1P30408 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.88□□□□□ -1.95
TM4SF1P30408 RNU6-261P-201ENST00000459506 102 ntBASIC2.88□□□□□ -1.95
TM4SF1P30408 RPL9P33-201ENST00000484311 566 ntBASIC2.88□□□□□ -1.95
TM4SF1P30408 AL163973.1-201ENST00000484753 577 ntBASIC2.88□□□□□ -1.95
TM4SF1P30408 RN7SL283P-201ENST00000489055 303 ntBASIC2.88□□□□□ -1.95
TM4SF1P30408 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TM4SF1P30408 RN7SKP219-201ENST00000516825 296 ntBASIC2.88□□□□□ -1.95
TM4SF1P30408 RNU6-56P-201ENST00000516986 93 ntBASIC2.88□□□□□ -1.95
TM4SF1P30408 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.88□□□□□ -1.95
TM4SF1P30408 MTATP6P3-201ENST00000581686 676 ntBASIC2.88□□□□□ -1.95
TM4SF1P30408 MIR4765-201ENST00000585007 77 ntBASIC2.88□□□□□ -1.95
TM4SF1P30408 AP001330.5-201ENST00000607176 411 ntBASIC2.88□□□□□ -1.95
TM4SF1P30408 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.88□□□□□ -1.95
TM4SF1P30408 RMST_4.1-201ENST00000616886 107 ntBASIC2.88□□□□□ -1.95
TM4SF1P30408 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.88□□□□□ -1.95
TM4SF1P30408 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
TM4SF1P30408 AL359880.1-201ENST00000621879 266 ntBASIC2.88□□□□□ -1.95
TM4SF1P30408 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.88□□□□□ -1.95
TM4SF1P30408 MIR219B-201ENST00000637023 88 ntBASIC2.88□□□□□ -1.95
TM4SF1P30408 AC099654.12-201ENST00000639868 649 ntBASIC2.88□□□□□ -1.95
TM4SF1P30408 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.88□□□□□ -1.95
TM4SF1P30408 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TM4SF1P30408 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TM4SF1P30408 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.88□□□□□ -1.95
TM4SF1P30408 AL359854.1-201ENST00000614203 1594 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TM4SF1P30408 AL139276.1-201ENST00000311910 1001 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 Y_RNA.255-201ENST00000364581 97 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 RNU4-75P-201ENST00000364621 146 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 RNU6-72P-201ENST00000384285 79 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 Y_RNA.480-201ENST00000384364 102 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 AL606923.1-201ENST00000406616 190 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.87□□□□□ -1.95
TM4SF1P30408 AC016831.2-201ENST00000417179 352 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.87□□□□□ -1.95
TM4SF1P30408 MTND3P21-201ENST00000433774 331 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 RPL7P54-201ENST00000438336 674 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 DNAJC19P4-201ENST00000440115 345 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 AC011005.2-201ENST00000487324 359 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 RNA5SP112-201ENST00000515937 99 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.87□□□□□ -1.95
TM4SF1P30408 AL137161.1-201ENST00000532231 390 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.87□□□□□ -1.95
TM4SF1P30408 BNIP3P6-201ENST00000549284 499 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 HIF1AP1-201ENST00000553642 175 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.87□□□□□ -1.95
TM4SF1P30408 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.87□□□□□ -1.95
TM4SF1P30408 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.87□□□□□ -1.95
TM4SF1P30408 AL670379.10-201ENST00000604330 253 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 AL670379.9-201ENST00000605428 253 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 AC096772.1-201ENST00000609146 564 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 U2.17-201ENST00000611454 95 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.87□□□□□ -1.95
TM4SF1P30408 AC139792.2-201ENST00000624218 587 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.87□□□□□ -1.95
TM4SF1P30408 MIR3529-201ENST00000637713 78 ntBASIC2.87□□□□□ -1.95
TM4SF1P30408 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
TM4SF1P30408 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TM4SF1P30408 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
TM4SF1P30408 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
TM4SF1P30408 MIR21-201ENST00000362134 72 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 AC068050.1-201ENST00000394891 380 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 FO393413.1-201ENST00000402892 195 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 MTCYBP8-201ENST00000422855 651 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 AC092427.1-202ENST00000430569 476 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 FABP5P14-201ENST00000437273 393 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 RPS15AP7-201ENST00000439294 405 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 PRPS1P1-201ENST00000445305 876 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 AL118520.1-201ENST00000450770 291 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 RPL23AP11-201ENST00000475260 469 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 RPL23AP70-201ENST00000483361 460 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 MRPL42P6-201ENST00000486397 371 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.86□□□□□ -1.95
TM4SF1P30408 Y_RNA.655-201ENST00000515919 96 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 RNA5SP458-201ENST00000516188 119 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 SNORA40.12-201ENST00000516329 111 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 RNA5SP380-201ENST00000517190 98 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.86□□□□□ -1.95
TM4SF1P30408 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.86□□□□□ -1.95
TM4SF1P30408 LRRC37A5P-203ENST00000580181 585 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 OR1M4P-201ENST00000589199 287 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 AP001596.2-201ENST00000608410 312 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 AL449363.1-201ENST00000617815 186 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 AC022418.1-201ENST00000624118 445 ntBASIC2.86□□□□□ -1.95
TM4SF1P30408 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TM4SF1P30408 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TM4SF1P30408 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.86□□□□□ -1.95
TM4SF1P30408 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
TM4SF1P30408 MIR221-201ENST00000385135 110 ntBASIC2.85□□□□□ -1.95
TM4SF1P30408 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
TM4SF1P30408 U8.13-201ENST00000390842 128 ntBASIC2.85□□□□□ -1.95
TM4SF1P30408 SNORD70.1-201ENST00000391007 85 ntBASIC2.85□□□□□ -1.95
TM4SF1P30408 RNU6-1158P-201ENST00000391167 107 ntBASIC2.85□□□□□ -1.95
TM4SF1P30408 RNU6-903P-201ENST00000391270 109 ntBASIC2.85□□□□□ -1.95
TM4SF1P30408 AL513475.1-201ENST00000406602 315 ntBASIC2.85□□□□□ -1.95
TM4SF1P30408 RNU6-607P-201ENST00000411283 108 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms