Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 UBE2V1P10-201ENST00000414685 269 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 PIGFP2-201ENST00000421400 651 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 AC133104.1-201ENST00000429100 218 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.15□□□□□ -2.07
PTPN6P29350 AC000111.3-201ENST00000433478 193 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 AL121890.1-201ENST00000435457 205 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.15□□□□□ -2.07
PTPN6P29350 AC009238.1-201ENST00000442165 424 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.15□□□□□ -2.07
PTPN6P29350 AC009237.6-201ENST00000446969 424 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 PSPHP1-201ENST00000450062 261 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 AC098826.2-201ENST00000452011 651 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 RNU7-182P-201ENST00000459009 62 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 AC008549.1-201ENST00000512900 643 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 MTCO3P28-201ENST00000513351 515 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.15□□□□□ -2.07
PTPN6P29350 CR383656.8-201ENST00000549046 145 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 AC105137.2-201ENST00000569073 466 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.15□□□□□ -2.07
PTPN6P29350 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.15□□□□□ -2.07
PTPN6P29350 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 AC072046.2-201ENST00000618366 268 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 AC011155.2-201ENST00000623202 216 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.15□□□□□ -2.07
PTPN6P29350 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.15□□□□□ -2.07
PTPN6P29350 RNU6-550P-201ENST00000391057 101 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 RNU6-1140P-201ENST00000410517 106 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 RNU4-53P-201ENST00000410828 140 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 MORF4L1P6-201ENST00000418771 268 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 AL161788.1-201ENST00000441805 169 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.14□□□□□ -2.07
PTPN6P29350 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.14□□□□□ -2.07
PTPN6P29350 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.14□□□□□ -2.07
PTPN6P29350 ANXA2P1-201ENST00000505539 926 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 RNU1-86P-201ENST00000516108 154 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 RNU1-107P-201ENST00000516617 154 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 Y_RNA.695-201ENST00000516715 107 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 RNA5SP503-201ENST00000517047 117 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.14□□□□□ -2.07
PTPN6P29350 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.14□□□□□ -2.07
PTPN6P29350 AC136619.2-201ENST00000563361 631 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 MIR4529-201ENST00000578110 78 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 AC007229.1-201ENST00000590455 412 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 AC073410.2-201ENST00000603240 332 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 AC008147.4-201ENST00000617570 1204 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 AC008121.3-201ENST00000618726 433 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 AC026585.1-201ENST00000619582 524 ntBASIC2.14□□□□□ -2.07
PTPN6P29350 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.14□□□□□ -2.07
PTPN6P29350 HAUS6P2-201ENST00000433254 2404 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
PTPN6P29350 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
PTPN6P29350 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
PTPN6P29350 RNU1-72P-201ENST00000362976 153 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 U8.2-201ENST00000363156 134 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 RNU6-282P-201ENST00000365357 103 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 RNU1-57P-201ENST00000384491 166 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 RAP1BP3-201ENST00000407180 549 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 SNORA3.2-201ENST00000408221 125 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.13□□□□□ -2.07
PTPN6P29350 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.13□□□□□ -2.07
PTPN6P29350 USP9YP27-201ENST00000418455 438 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 AIMP1P2-201ENST00000425294 312 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 MTATP6P17-201ENST00000431030 672 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.13□□□□□ -2.07
PTPN6P29350 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.13□□□□□ -2.07
PTPN6P29350 AL162395.1-201ENST00000457882 422 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 AC022364.2-201ENST00000457963 554 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 YWHAEP4-201ENST00000505390 198 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.13□□□□□ -2.07
PTPN6P29350 MTND3P25-201ENST00000509243 135 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 RNU1-41P-201ENST00000516161 162 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 SNORD27.1-201ENST00000516319 72 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 RNU1-48P-201ENST00000516400 162 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.13□□□□□ -2.07
PTPN6P29350 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.13□□□□□ -2.07
PTPN6P29350 MIR3913-1-201ENST00000577744 102 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.13□□□□□ -2.07
PTPN6P29350 MIR4775-201ENST00000581168 75 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 MIR5002-201ENST00000584713 97 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.13□□□□□ -2.07
PTPN6P29350 AL121917.1-203ENST00000605534 577 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 AC109347.2-201ENST00000610220 349 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
PTPN6P29350 AP001486.3-201ENST00000615334 372 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 AL158063.1-201ENST00000615349 536 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 AC009090.3-201ENST00000616553 565 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 AL390237.1-201ENST00000404226 1415 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 ZNF658B-202ENST00000615961 3375 ntBASIC2.13□□□□□ -2.07
PTPN6P29350 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
PTPN6P29350 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PTPN6P29350 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PTPN6P29350 RNU6-1010P-201ENST00000362757 107 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 RNU6-181P-201ENST00000363225 107 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 RNU6-487P-201ENST00000365430 104 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 MIR561-201ENST00000385216 97 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PTPN6P29350 RN7SKP192-201ENST00000411291 327 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms