Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RNU6-500P-201ENST00000362349 107 ntBASIC1.61□□□□□ -2.15
USF1P22415 RNA5SP276-201ENST00000362580 94 ntBASIC1.61□□□□□ -2.15
USF1P22415 RNU6-529P-201ENST00000363383 104 ntBASIC1.61□□□□□ -2.15
USF1P22415 RNU4-1-201ENST00000363925 141 ntBASIC1.61□□□□□ -2.15
USF1P22415 SNORD14B-201ENST00000364533 90 ntBASIC1.61□□□□□ -2.15
USF1P22415 RNU6-622P-201ENST00000384272 103 ntBASIC1.61□□□□□ -2.15
USF1P22415 MIR10A-201ENST00000385043 110 ntBASIC1.61□□□□□ -2.15
USF1P22415 RNA5SP450-201ENST00000411206 102 ntBASIC1.61□□□□□ -2.15
USF1P22415 XKRYP1-201ENST00000423438 492 ntBASIC1.61□□□□□ -2.15
USF1P22415 XKRYP2-201ENST00000432915 492 ntBASIC1.61□□□□□ -2.15
USF1P22415 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.61□□□□□ -2.15
USF1P22415 MTCO3P5-201ENST00000433620 714 ntBASIC1.61□□□□□ -2.15
USF1P22415 AL353689.1-201ENST00000438895 199 ntBASIC1.61□□□□□ -2.15
USF1P22415 AL512286.1-201ENST00000439244 400 ntBASIC1.61□□□□□ -2.15
USF1P22415 USP9YP8-201ENST00000441913 500 ntBASIC1.61□□□□□ -2.15
USF1P22415 MTND6P13-201ENST00000443510 523 ntBASIC1.61□□□□□ -2.15
USF1P22415 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.61□□□□□ -2.15
USF1P22415 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
USF1P22415 TPT1P8-201ENST00000510120 555 ntBASIC1.61□□□□□ -2.15
USF1P22415 AC108729.3-201ENST00000513484 108 ntBASIC1.61□□□□□ -2.15
USF1P22415 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.61□□□□□ -2.15
USF1P22415 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.61□□□□□ -2.15
USF1P22415 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.61□□□□□ -2.15
USF1P22415 AC002400.1-201ENST00000569310 726 ntBASIC1.61□□□□□ -2.15
USF1P22415 MTCYBP33-201ENST00000575007 1130 ntBASIC1.61□□□□□ -2.15
USF1P22415 MIR5697-201ENST00000578045 78 ntBASIC1.61□□□□□ -2.15
USF1P22415 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.61□□□□□ -2.15
USF1P22415 AC008751.2-201ENST00000597885 980 ntBASIC1.61□□□□□ -2.15
USF1P22415 AL139286.2-201ENST00000606838 396 ntBASIC1.61□□□□□ -2.15
USF1P22415 AC012409.4-201ENST00000612923 249 ntBASIC1.61□□□□□ -2.15
USF1P22415 SCARNA4-202ENST00000625402 129 ntBASIC1.61□□□□□ -2.15
USF1P22415 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.61□□□□□ -2.15
USF1P22415 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.61□□□□□ -2.15
USF1P22415 AL354685.2-201ENST00000448218 1447 ntBASIC1.6□□□□□ -2.15
USF1P22415 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
USF1P22415 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.6□□□□□ -2.15
USF1P22415 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.6□□□□□ -2.15
USF1P22415 AC114491.1-201ENST00000416095 246 ntBASIC1.6□□□□□ -2.15
USF1P22415 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.6□□□□□ -2.15
USF1P22415 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.6□□□□□ -2.15
USF1P22415 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.6□□□□□ -2.15
USF1P22415 USP9YP15-201ENST00000442391 422 ntBASIC1.6□□□□□ -2.15
USF1P22415 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.6□□□□□ -2.15
USF1P22415 AC006026.2-201ENST00000457376 180 ntBASIC1.6□□□□□ -2.15
USF1P22415 AC108078.2-201ENST00000510750 236 ntBASIC1.6□□□□□ -2.15
USF1P22415 AC091965.2-201ENST00000512324 613 ntBASIC1.6□□□□□ -2.15
USF1P22415 RNU6-123P-201ENST00000516163 102 ntBASIC1.6□□□□□ -2.15
USF1P22415 RNU6-667P-201ENST00000517186 102 ntBASIC1.6□□□□□ -2.15
USF1P22415 AP003181.2-201ENST00000528941 181 ntBASIC1.6□□□□□ -2.15
USF1P22415 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.6□□□□□ -2.15
USF1P22415 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.6□□□□□ -2.15
USF1P22415 MIR5089-201ENST00000580047 84 ntBASIC1.6□□□□□ -2.15
USF1P22415 BNIP3P39-201ENST00000601077 554 ntBASIC1.6□□□□□ -2.15
USF1P22415 AL353778.1-201ENST00000603149 408 ntBASIC1.6□□□□□ -2.15
USF1P22415 AC138749.5-201ENST00000611461 208 ntBASIC1.6□□□□□ -2.15
USF1P22415 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.6□□□□□ -2.15
USF1P22415 AC091834.1-201ENST00000614543 472 ntBASIC1.6□□□□□ -2.15
USF1P22415 AC116165.2-201ENST00000616705 206 ntBASIC1.6□□□□□ -2.15
USF1P22415 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.6□□□□□ -2.15
USF1P22415 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
USF1P22415 OR4G2P-201ENST00000328113 903 ntBASIC1.59□□□□□ -2.15
USF1P22415 RNU6-655P-201ENST00000362858 107 ntBASIC1.59□□□□□ -2.15
USF1P22415 RNU6-1214P-201ENST00000363650 109 ntBASIC1.59□□□□□ -2.15
USF1P22415 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.59□□□□□ -2.15
USF1P22415 CISD1P1-201ENST00000393907 327 ntBASIC1.59□□□□□ -2.15
USF1P22415 SUMO2P12-201ENST00000405924 140 ntBASIC1.59□□□□□ -2.15
USF1P22415 RNA5SP390-201ENST00000410191 113 ntBASIC1.59□□□□□ -2.15
USF1P22415 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
USF1P22415 RPL23AP36-201ENST00000413895 458 ntBASIC1.59□□□□□ -2.15
USF1P22415 AL158823.1-201ENST00000418441 478 ntBASIC1.59□□□□□ -2.15
USF1P22415 EIF1AXP1-201ENST00000419267 435 ntBASIC1.59□□□□□ -2.15
USF1P22415 RPL31P63-201ENST00000422565 375 ntBASIC1.59□□□□□ -2.15
USF1P22415 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.59□□□□□ -2.15
USF1P22415 AL365400.1-201ENST00000431854 640 ntBASIC1.59□□□□□ -2.15
USF1P22415 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.59□□□□□ -2.15
USF1P22415 RPS24P1-201ENST00000438550 371 ntBASIC1.59□□□□□ -2.15
USF1P22415 CALM1P1-201ENST00000442082 433 ntBASIC1.59□□□□□ -2.15
USF1P22415 MTND5P2-201ENST00000442927 1142 ntBASIC1.59□□□□□ -2.15
USF1P22415 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.59□□□□□ -2.15
USF1P22415 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.59□□□□□ -2.15
USF1P22415 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.59□□□□□ -2.15
USF1P22415 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.59□□□□□ -2.15
USF1P22415 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.59□□□□□ -2.15
USF1P22415 AC006512.1-201ENST00000468816 291 ntBASIC1.59□□□□□ -2.15
USF1P22415 AP001025.1-201ENST00000486139 332 ntBASIC1.59□□□□□ -2.15
USF1P22415 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.59□□□□□ -2.15
USF1P22415 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
USF1P22415 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.59□□□□□ -2.15
USF1P22415 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
USF1P22415 SNORA25.15-201ENST00000516487 89 ntBASIC1.59□□□□□ -2.15
USF1P22415 SNORA31.23-201ENST00000517219 133 ntBASIC1.59□□□□□ -2.15
USF1P22415 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.59□□□□□ -2.15
USF1P22415 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.59□□□□□ -2.15
USF1P22415 MIR4299-201ENST00000577899 72 ntBASIC1.59□□□□□ -2.15
USF1P22415 AC090897.2-201ENST00000581715 130 ntBASIC1.59□□□□□ -2.15
USF1P22415 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.59□□□□□ -2.15
USF1P22415 DEFB131E-202ENST00000602581 683 ntBASIC1.59□□□□□ -2.15
USF1P22415 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.59□□□□□ -2.15
USF1P22415 AC009878.1-201ENST00000621819 340 ntBASIC1.59□□□□□ -2.15
USF1P22415 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms