Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC008549.1-201ENST00000512900 643 ntBASIC2.23□□□□□ -2.05
HLA-DPA1P20036 SNORA31.11-201ENST00000516528 139 ntBASIC2.23□□□□□ -2.05
HLA-DPA1P20036 AP002453.2-201ENST00000533503 320 ntBASIC2.23□□□□□ -2.05
HLA-DPA1P20036 SNRPGP18-201ENST00000553000 214 ntBASIC2.23□□□□□ -2.05
HLA-DPA1P20036 MIR4287-201ENST00000579398 78 ntBASIC2.23□□□□□ -2.05
HLA-DPA1P20036 AC073539.2-201ENST00000597113 165 ntBASIC2.23□□□□□ -2.05
HLA-DPA1P20036 SNRPGP17-201ENST00000603780 214 ntBASIC2.23□□□□□ -2.05
HLA-DPA1P20036 MIR98-201ENST00000606724 119 ntBASIC2.23□□□□□ -2.05
HLA-DPA1P20036 RMST_4.1-201ENST00000616886 107 ntBASIC2.23□□□□□ -2.05
HLA-DPA1P20036 AL603755.1-201ENST00000619504 163 ntBASIC2.23□□□□□ -2.05
HLA-DPA1P20036 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DPA1P20036 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DPA1P20036 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HLA-DPA1P20036 RNU4-21P-201ENST00000362802 126 ntBASIC2.22□□□□□ -2.05
HLA-DPA1P20036 RNU6-1287P-201ENST00000362914 107 ntBASIC2.22□□□□□ -2.05
HLA-DPA1P20036 RNU6-1060P-201ENST00000384664 107 ntBASIC2.22□□□□□ -2.05
HLA-DPA1P20036 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
HLA-DPA1P20036 SNORA40.19-201ENST00000390846 128 ntBASIC2.22□□□□□ -2.05
HLA-DPA1P20036 CBX3P9-201ENST00000402326 552 ntBASIC2.22□□□□□ -2.05
HLA-DPA1P20036 SNORA3.2-201ENST00000408221 125 ntBASIC2.22□□□□□ -2.05
HLA-DPA1P20036 RNU2-32P-201ENST00000411193 191 ntBASIC2.22□□□□□ -2.05
HLA-DPA1P20036 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DPA1P20036 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DPA1P20036 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DPA1P20036 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DPA1P20036 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DPA1P20036 AP000763.2-201ENST00000540641 163 ntBASIC2.22□□□□□ -2.05
HLA-DPA1P20036 PRELID2P1-201ENST00000552837 301 ntBASIC2.22□□□□□ -2.05
HLA-DPA1P20036 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
HLA-DPA1P20036 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.21□□□□□ -2.05
HLA-DPA1P20036 ZNF702P-202ENST00000434269 1966 ntBASIC2.21□□□□□ -2.05
HLA-DPA1P20036 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DPA1P20036 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HLA-DPA1P20036 RNA5SP276-201ENST00000362580 94 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 RNU6-78P-201ENST00000362897 107 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 SNORA62.1-201ENST00000364287 154 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 RNU5E-7P-201ENST00000365290 117 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 RNU6-546P-201ENST00000383991 107 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 MIR518A2-201ENST00000384966 87 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 BTF3L4P1-201ENST00000413813 468 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.21□□□□□ -2.06
HLA-DPA1P20036 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DPA1P20036 AL356320.1-201ENST00000429616 163 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 RPL31P35-201ENST00000431058 377 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 snoU13.14-201ENST00000459372 104 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 AC006512.1-201ENST00000468816 291 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 RN7SL429P-201ENST00000479090 223 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 RN7SL489P-201ENST00000486185 223 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 RN7SL327P-201ENST00000488659 223 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DPA1P20036 AP003392.2-201ENST00000527269 208 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DPA1P20036 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DPA1P20036 RN7SL853P-201ENST00000617250 223 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 MIR6873-201ENST00000622788 63 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 AC011155.2-201ENST00000623202 216 ntBASIC2.21□□□□□ -2.06
HLA-DPA1P20036 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DPA1P20036 AC002543.1-201ENST00000299783 1954 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.2□□□□□ -2.06
HLA-DPA1P20036 RNU6-45P-201ENST00000384471 107 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 RNY3P10-201ENST00000384764 102 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 RNU6-550P-201ENST00000391057 101 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 SNORA46.1-201ENST00000391069 153 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 RNA5SP425-201ENST00000410336 112 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 RNU6-607P-201ENST00000411283 108 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DPA1P20036 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DPA1P20036 Z98742.3-201ENST00000418637 326 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 AC096920.1-201ENST00000423991 241 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 DNAJC19P4-201ENST00000440115 345 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 AL022238.1-201ENST00000442557 355 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 AL353705.4-201ENST00000449661 238 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 PMCHL2-203ENST00000457791 237 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DPA1P20036 AC074344.1-201ENST00000512823 224 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 SCARNA16.3-201ENST00000516595 184 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.2□□□□□ -2.06
HLA-DPA1P20036 CYCSP27-201ENST00000527643 293 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.2□□□□□ -2.06
HLA-DPA1P20036 LRRC34P1-201ENST00000542742 915 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 AC026464.5-201ENST00000562497 722 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DPA1P20036 CLIC4P2-201ENST00000601934 717 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 Z82243.1-201ENST00000609432 473 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 SDR42E1P4-201ENST00000620894 481 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 AC091931.1-201ENST00000623488 728 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 MTND5P6-201ENST00000422338 1798 ntBASIC2.2□□□□□ -2.06
HLA-DPA1P20036 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DPA1P20036 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.19□□□□□ -2.06
HLA-DPA1P20036 U8.2-201ENST00000363156 134 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 RNU6-527P-201ENST00000363425 104 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 SNORA26.8-201ENST00000391306 124 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
HLA-DPA1P20036 AL512604.1-201ENST00000404812 257 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 RNU2-3P-201ENST00000410144 191 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 RNA5SP450-201ENST00000411206 102 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 MTND3P17-201ENST00000416968 344 ntBASIC2.19□□□□□ -2.06
HLA-DPA1P20036 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms