Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RPL7P43-201ENST00000478876 753 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 AC011005.2-201ENST00000487324 359 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.1□□□□□ -2.07
XRCC1P18887 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.1□□□□□ -2.07
XRCC1P18887 AC092436.1-201ENST00000506450 503 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.1□□□□□ -2.07
XRCC1P18887 AC104136.1-201ENST00000512969 394 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 MTCO3P28-201ENST00000513351 515 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 Y_RNA.695-201ENST00000516715 107 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.1□□□□□ -2.07
XRCC1P18887 OR5AL2P-201ENST00000532185 920 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 AL133241.1-201ENST00000556832 487 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 AC012640.5-201ENST00000623897 319 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 AC097520.1-201ENST00000624435 385 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.1□□□□□ -2.07
XRCC1P18887 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.1□□□□□ -2.07
XRCC1P18887 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.09□□□□□ -2.07
XRCC1P18887 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
XRCC1P18887 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
XRCC1P18887 SNORD3E-201ENST00000362899 217 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 RNU6-942P-201ENST00000363002 107 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 SNORD114-19-201ENST00000363072 75 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 SNORA64-201ENST00000384674 134 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 RN7SKP32-201ENST00000410167 303 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 RNU4-26P-201ENST00000410270 107 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 RNU2-63P-201ENST00000410792 194 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 RPL21P90-201ENST00000415692 466 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.09□□□□□ -2.07
XRCC1P18887 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.09□□□□□ -2.07
XRCC1P18887 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.09□□□□□ -2.07
XRCC1P18887 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.09□□□□□ -2.07
XRCC1P18887 AC010095.1-201ENST00000443543 144 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 AL360271.2-201ENST00000447710 161 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 ARL2BPP4-201ENST00000506854 471 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 AC008526.1-201ENST00000509149 338 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 AC109329.1-201ENST00000518744 317 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.09□□□□□ -2.07
XRCC1P18887 AP005902.1-201ENST00000521358 186 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.09□□□□□ -2.07
XRCC1P18887 AP000873.5-201ENST00000533906 236 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.09□□□□□ -2.07
XRCC1P18887 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.09□□□□□ -2.07
XRCC1P18887 MIR4775-201ENST00000581168 75 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 AC040904.1-201ENST00000590850 223 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 AC025811.1-201ENST00000604312 472 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 MIR5739-201ENST00000619803 80 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 Z69908.1-201ENST00000622603 247 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 AC011155.2-201ENST00000623202 216 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 AL359740.1-201ENST00000624340 592 ntBASIC2.09□□□□□ -2.07
XRCC1P18887 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
XRCC1P18887 HSPA8P4-201ENST00000511877 1920 ntBASIC2.09□□□□□ -2.08
XRCC1P18887 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.08□□□□□ -2.08
XRCC1P18887 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.08□□□□□ -2.08
XRCC1P18887 AL390237.1-201ENST00000404226 1415 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.08□□□□□ -2.08
XRCC1P18887 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.08□□□□□ -2.08
XRCC1P18887 OR4G2P-201ENST00000328113 903 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 RNU6-1287P-201ENST00000362914 107 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 RNU4-48P-201ENST00000365559 182 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 RNU6-1060P-201ENST00000384664 107 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 AL079342.1-201ENST00000401460 267 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 U3.40-201ENST00000408706 208 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.08□□□□□ -2.08
XRCC1P18887 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.08□□□□□ -2.08
XRCC1P18887 CYCSP48-201ENST00000417124 323 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 AL365400.1-201ENST00000431854 640 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.08□□□□□ -2.08
XRCC1P18887 MTND1P26-201ENST00000440488 538 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.08□□□□□ -2.08
XRCC1P18887 AL118520.1-201ENST00000450770 291 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.08□□□□□ -2.08
XRCC1P18887 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.08□□□□□ -2.08
XRCC1P18887 CYP2C59P-201ENST00000457790 269 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 snoU13.26-201ENST00000459452 105 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 AC112771.1-201ENST00000463581 102 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 RPS27P21-201ENST00000486977 252 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 AC117522.2-201ENST00000510049 657 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.08□□□□□ -2.08
XRCC1P18887 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.08□□□□□ -2.08
XRCC1P18887 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.08□□□□□ -2.08
XRCC1P18887 PSMA3P-201ENST00000555485 635 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 AC025678.1-201ENST00000567861 338 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 MIR3913-1-201ENST00000577744 102 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 LRRC37A5P-203ENST00000580181 585 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 RMST_4.1-201ENST00000616886 107 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 U4atac.1-201ENST00000618345 95 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 AC009161.2-201ENST00000624626 138 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 AP003400.5-201ENST00000624827 617 ntBASIC2.08□□□□□ -2.08
XRCC1P18887 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.08□□□□□ -2.08
XRCC1P18887 ELL2P3-201ENST00000457883 1602 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
XRCC1P18887 RNU6-1010P-201ENST00000362757 107 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 RNU6-181P-201ENST00000363225 107 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 SNORA62.1-201ENST00000364287 154 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 RNA5SP125-201ENST00000364843 120 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 RNU6-384P-201ENST00000364900 104 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 RNA5SP240-201ENST00000365355 128 ntBASIC2.07□□□□□ -2.08
XRCC1P18887 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms