Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.76□□□□□ -1.81
ATF4P18848 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.76□□□□□ -1.81
ATF4P18848 INTS6P1-201ENST00000504674 2530 ntBASIC3.76□□□□□ -1.81
ATF4P18848 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ATF4P18848 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ATF4P18848 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ATF4P18848 AC006971.1-201ENST00000407916 4486 ntBASIC3.76□□□□□ -1.81
ATF4P18848 SNURFL-201ENST00000309296 343 ntBASIC3.76□□□□□ -1.81
ATF4P18848 Y_RNA.40-201ENST00000362645 93 ntBASIC3.76□□□□□ -1.81
ATF4P18848 RNU6-1301P-201ENST00000362724 104 ntBASIC3.76□□□□□ -1.81
ATF4P18848 SET-203ENST00000372688 801 ntTSL 2 BASIC3.76□□□□□ -1.81
ATF4P18848 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
ATF4P18848 RNU6-708P-201ENST00000384217 107 ntBASIC3.76□□□□□ -1.81
ATF4P18848 MIR568-201ENST00000385036 95 ntBASIC3.76□□□□□ -1.81
ATF4P18848 RNU6-159P-201ENST00000391080 106 ntBASIC3.76□□□□□ -1.81
ATF4P18848 AIMP1P2-201ENST00000425294 312 ntBASIC3.76□□□□□ -1.81
ATF4P18848 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.76□□□□□ -1.81
ATF4P18848 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.76□□□□□ -1.81
ATF4P18848 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.76□□□□□ -1.81
ATF4P18848 FCF1P4-201ENST00000448326 183 ntBASIC3.76□□□□□ -1.81
ATF4P18848 AP000705.1-201ENST00000454567 350 ntBASIC3.76□□□□□ -1.81
ATF4P18848 AL121594.1-201ENST00000475906 575 ntBASIC3.76□□□□□ -1.81
ATF4P18848 RPL31P41-201ENST00000477967 372 ntBASIC3.76□□□□□ -1.81
ATF4P18848 BX284632.1-201ENST00000478218 541 ntBASIC3.76□□□□□ -1.81
ATF4P18848 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.76□□□□□ -1.81
ATF4P18848 SNORA31.6-201ENST00000516241 130 ntBASIC3.76□□□□□ -1.81
ATF4P18848 RN7SKP147-201ENST00000517154 244 ntBASIC3.76□□□□□ -1.81
ATF4P18848 SCARNA11.3-201ENST00000517276 130 ntBASIC3.76□□□□□ -1.81
ATF4P18848 AC004817.2-201ENST00000561794 651 ntBASIC3.76□□□□□ -1.81
ATF4P18848 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.76□□□□□ -1.81
ATF4P18848 MIR5695-201ENST00000579717 85 ntBASIC3.76□□□□□ -1.81
ATF4P18848 AC103810.1-201ENST00000579873 453 ntBASIC3.76□□□□□ -1.81
ATF4P18848 MIR4503-201ENST00000582187 83 ntBASIC3.76□□□□□ -1.81
ATF4P18848 MIR3149-201ENST00000584629 83 ntBASIC3.76□□□□□ -1.81
ATF4P18848 AL670379.2-201ENST00000604983 252 ntBASIC3.76□□□□□ -1.81
ATF4P18848 MIR486-1-201ENST00000612171 68 ntBASIC3.76□□□□□ -1.81
ATF4P18848 MIR6798-201ENST00000612887 67 ntBASIC3.76□□□□□ -1.81
ATF4P18848 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.76□□□□□ -1.81
ATF4P18848 U7.8-201ENST00000619968 63 ntBASIC3.76□□□□□ -1.81
ATF4P18848 U4.1-201ENST00000620349 87 ntBASIC3.76□□□□□ -1.81
ATF4P18848 AC091905.4-201ENST00000623432 202 ntBASIC3.76□□□□□ -1.81
ATF4P18848 AC110774.1-201ENST00000623567 2018 ntBASIC3.76□□□□□ -1.81
ATF4P18848 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
ATF4P18848 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.76□□□□□ -1.81
ATF4P18848 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
ATF4P18848 AC026241.1-201ENST00000517873 2142 ntBASIC3.76□□□□□ -1.81
ATF4P18848 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
ATF4P18848 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATF4P18848 RNA5SP388-201ENST00000362584 119 ntBASIC3.75□□□□□ -1.81
ATF4P18848 RNU6-486P-201ENST00000363116 107 ntBASIC3.75□□□□□ -1.81
ATF4P18848 Y_RNA.452-201ENST00000384202 108 ntBASIC3.75□□□□□ -1.81
ATF4P18848 Y_RNA.556-201ENST00000384677 113 ntBASIC3.75□□□□□ -1.81
ATF4P18848 U3.19-201ENST00000390893 196 ntBASIC3.75□□□□□ -1.81
ATF4P18848 CBX3P9-201ENST00000402326 552 ntBASIC3.75□□□□□ -1.81
ATF4P18848 RBMY1KP-201ENST00000423480 476 ntBASIC3.75□□□□□ -1.81
ATF4P18848 AC091286.1-201ENST00000431233 461 ntBASIC3.75□□□□□ -1.81
ATF4P18848 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.75□□□□□ -1.81
ATF4P18848 RPL21P2-201ENST00000440049 481 ntBASIC3.75□□□□□ -1.81
ATF4P18848 AC096638.1-201ENST00000444678 216 ntBASIC3.75□□□□□ -1.81
ATF4P18848 RPS3P1-201ENST00000456781 192 ntBASIC3.75□□□□□ -1.81
ATF4P18848 snoU13.20-201ENST00000459180 104 ntBASIC3.75□□□□□ -1.81
ATF4P18848 RPS17P2-201ENST00000461663 408 ntBASIC3.75□□□□□ -1.81
ATF4P18848 AC006445.1-201ENST00000491925 405 ntBASIC3.75□□□□□ -1.81
ATF4P18848 COX6B1P5-201ENST00000509843 249 ntBASIC3.75□□□□□ -1.81
ATF4P18848 RNU6-397P-201ENST00000516226 104 ntBASIC3.75□□□□□ -1.81
ATF4P18848 RNY3P15-201ENST00000516297 97 ntBASIC3.75□□□□□ -1.81
ATF4P18848 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.75□□□□□ -1.81
ATF4P18848 AP000827.1-201ENST00000527814 258 ntBASIC3.75□□□□□ -1.81
ATF4P18848 AC090517.1-201ENST00000569307 266 ntBASIC3.75□□□□□ -1.81
ATF4P18848 AC011471.1-201ENST00000585766 187 ntBASIC3.75□□□□□ -1.81
ATF4P18848 Y_RNA.772-201ENST00000606692 102 ntBASIC3.75□□□□□ -1.81
ATF4P18848 FAM27B-201ENST00000610601 213 ntBASIC3.75□□□□□ -1.81
ATF4P18848 Mico1.1-201ENST00000611698 204 ntBASIC3.75□□□□□ -1.81
ATF4P18848 AC005520.5-201ENST00000613926 164 ntBASIC3.75□□□□□ -1.81
ATF4P18848 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.75□□□□□ -1.81
ATF4P18848 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.75□□□□□ -1.81
ATF4P18848 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.75□□□□□ -1.81
ATF4P18848 AC002064.3-201ENST00000623448 346 ntBASIC3.75□□□□□ -1.81
ATF4P18848 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.75□□□□□ -1.81
ATF4P18848 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.75□□□□□ -1.81
ATF4P18848 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATF4P18848 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ATF4P18848 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATF4P18848 Y_RNA.439-201ENST00000384119 94 ntBASIC3.74□□□□□ -1.81
ATF4P18848 RNU6-398P-201ENST00000384143 109 ntBASIC3.74□□□□□ -1.81
ATF4P18848 RNA5SP87-201ENST00000384155 118 ntBASIC3.74□□□□□ -1.81
ATF4P18848 MIR585-201ENST00000384887 94 ntBASIC3.74□□□□□ -1.81
ATF4P18848 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.74□□□□□ -1.81
ATF4P18848 AL512633.1-201ENST00000399931 655 ntBASIC3.74□□□□□ -1.81
ATF4P18848 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.74□□□□□ -1.81
ATF4P18848 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.74□□□□□ -1.81
ATF4P18848 IPO7P1-201ENST00000442031 636 ntBASIC3.74□□□□□ -1.81
ATF4P18848 AL731563.1-201ENST00000442202 214 ntBASIC3.74□□□□□ -1.81
ATF4P18848 DYNLT3P2-201ENST00000442517 295 ntBASIC3.74□□□□□ -1.81
ATF4P18848 RPS29P12-201ENST00000460178 152 ntBASIC3.74□□□□□ -1.81
ATF4P18848 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.74□□□□□ -1.81
ATF4P18848 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.74□□□□□ -1.81
ATF4P18848 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.74□□□□□ -1.81
ATF4P18848 SEM1P1-201ENST00000506694 209 ntBASIC3.74□□□□□ -1.81
ATF4P18848 AC133555.2-201ENST00000550213 292 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms