Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AL121594.1-201ENST00000475906 575 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 RNU2-53P-201ENST00000516257 147 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.22□□□□□ -1.89
PF4V1P10720 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.22□□□□□ -1.89
PF4V1P10720 AC025627.2-201ENST00000576220 160 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 MIR5571-201ENST00000577998 113 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 RN7SL600P-201ENST00000581811 299 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 MIR3199-1-201ENST00000582434 88 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.22□□□□□ -1.89
PF4V1P10720 AC060766.3-201ENST00000591442 263 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 AL442067.2-201ENST00000614033 363 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 MIR4727-201ENST00000622232 55 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 MIR6500-201ENST00000622700 86 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 AL160413.1-201ENST00000622780 310 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 AC233981.2-201ENST00000611524 1614 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.22□□□□□ -1.89
PF4V1P10720 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
PF4V1P10720 AC006026.1-201ENST00000444025 1803 ntBASIC3.21□□□□□ -1.89
PF4V1P10720 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PF4V1P10720 AC080128.1-201ENST00000474389 1917 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PF4V1P10720 RNU4-56P-201ENST00000364700 142 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 CBX3P9-201ENST00000402326 552 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 RN7SKP220-201ENST00000410611 288 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 RNU4-6P-201ENST00000410804 122 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.21□□□□□ -1.9
PF4V1P10720 AL445584.1-201ENST00000431451 330 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 HLA-N-201ENST00000437516 135 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 AC011816.1-201ENST00000441346 546 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 RPS12P18-201ENST00000442381 270 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 MTCO3P10-201ENST00000455912 772 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 AC080013.2-201ENST00000460866 323 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 AC017037.1-201ENST00000508460 471 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 RNU5F-2P-201ENST00000516066 82 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 SCARNA16.2-201ENST00000516520 172 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 RNA5SP384-201ENST00000516615 116 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 RNU6-567P-201ENST00000516746 107 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.21□□□□□ -1.9
PF4V1P10720 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.21□□□□□ -1.9
PF4V1P10720 AC006557.5-201ENST00000603126 811 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 CYP2C61P-201ENST00000604072 290 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 AC069294.1-201ENST00000608397 350 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 SNORD98-201ENST00000636377 67 ntBASIC3.21□□□□□ -1.9
PF4V1P10720 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PF4V1P10720 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.21□□□□□ -1.9
PF4V1P10720 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PF4V1P10720 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PF4V1P10720 AC026241.1-201ENST00000517873 2142 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
PF4V1P10720 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PF4V1P10720 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PF4V1P10720 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PF4V1P10720 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PF4V1P10720 Y_RNA.146-201ENST00000363549 102 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 RHOT1P2-201ENST00000366423 333 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 RNU6-890P-201ENST00000384121 107 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 Y_RNA.533-201ENST00000384596 114 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 RNU6-331P-201ENST00000384724 107 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 AC243428.1-201ENST00000421099 264 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 AL590135.1-201ENST00000422215 156 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 AC019205.3-201ENST00000424573 156 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 AC008267.5-201ENST00000424928 265 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 RPL30P4-201ENST00000429309 333 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 RPL23AP50-201ENST00000434149 455 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 AC016700.2-201ENST00000446011 156 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 UBE2V1P7-201ENST00000446395 340 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.2□□□□□ -1.9
PF4V1P10720 AC006517.1-201ENST00000480485 328 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 AC015911.1-201ENST00000495111 156 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.2□□□□□ -1.9
PF4V1P10720 HMGB1P35-201ENST00000503360 598 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.2□□□□□ -1.9
PF4V1P10720 CBX3P8-201ENST00000532412 525 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PF4V1P10720 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.2□□□□□ -1.9
PF4V1P10720 MIR4429-201ENST00000580105 73 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 AC105245.1-201ENST00000581934 244 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 MIR5684-201ENST00000585074 65 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 MIR432-201ENST00000606207 94 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 AC135507.2-201ENST00000612443 309 ntBASIC3.2□□□□□ -1.9
PF4V1P10720 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.2□□□□□ -1.9
PF4V1P10720 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PF4V1P10720 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PF4V1P10720 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PF4V1P10720 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PF4V1P10720 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PF4V1P10720 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PF4V1P10720 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PF4V1P10720 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.19□□□□□ -1.9
PF4V1P10720 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.19□□□□□ -1.9
PF4V1P10720 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PF4V1P10720 RNU6-595P-201ENST00000363944 107 ntBASIC3.19□□□□□ -1.9
PF4V1P10720 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PF4V1P10720 MIR200C-201ENST00000384980 68 ntBASIC3.19□□□□□ -1.9
PF4V1P10720 MIR670-201ENST00000390142 98 ntBASIC3.19□□□□□ -1.9
PF4V1P10720 RNU6-55P-201ENST00000411092 107 ntBASIC3.19□□□□□ -1.9
PF4V1P10720 RHEBP3-201ENST00000411920 351 ntBASIC3.19□□□□□ -1.9
PF4V1P10720 AC126124.2-201ENST00000413542 321 ntBASIC3.19□□□□□ -1.9
PF4V1P10720 AC018644.1-201ENST00000429934 551 ntBASIC3.19□□□□□ -1.9
PF4V1P10720 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms