Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC027575.1-201ENST00000481064 460 ntBASIC1.54□□□□□ -2.16
UBCP0CG48 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.54□□□□□ -2.16
UBCP0CG48 AC108078.2-201ENST00000510750 236 ntBASIC1.54□□□□□ -2.16
UBCP0CG48 RNU6-965P-201ENST00000516721 96 ntBASIC1.54□□□□□ -2.16
UBCP0CG48 BNIP3P6-201ENST00000549284 499 ntBASIC1.54□□□□□ -2.16
UBCP0CG48 MIR3198-2-201ENST00000577868 80 ntBASIC1.54□□□□□ -2.16
UBCP0CG48 AL359999.1-201ENST00000604513 294 ntBASIC1.54□□□□□ -2.16
UBCP0CG48 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.54□□□□□ -2.16
UBCP0CG48 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.54□□□□□ -2.16
UBCP0CG48 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
UBCP0CG48 Y_RNA.99-201ENST00000363138 105 ntBASIC1.53□□□□□ -2.16
UBCP0CG48 RNU4-1-201ENST00000363925 141 ntBASIC1.53□□□□□ -2.16
UBCP0CG48 RPS3AP36-201ENST00000398190 775 ntBASIC1.53□□□□□ -2.16
UBCP0CG48 MIR934-201ENST00000401241 83 ntBASIC1.53□□□□□ -2.16
UBCP0CG48 BTF3L4P1-201ENST00000413813 468 ntBASIC1.53□□□□□ -2.16
UBCP0CG48 AL008987.1-201ENST00000415528 237 ntBASIC1.53□□□□□ -2.16
UBCP0CG48 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.53□□□□□ -2.16
UBCP0CG48 CBX3P6-201ENST00000430257 527 ntBASIC1.53□□□□□ -2.16
UBCP0CG48 AC119618.1-201ENST00000434191 222 ntBASIC1.53□□□□□ -2.16
UBCP0CG48 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.53□□□□□ -2.16
UBCP0CG48 DUXAP8-207ENST00000456786 622 ntBASIC1.53□□□□□ -2.16
UBCP0CG48 RPL30P1-201ENST00000488676 339 ntBASIC1.53□□□□□ -2.16
UBCP0CG48 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.53□□□□□ -2.16
UBCP0CG48 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.53□□□□□ -2.16
UBCP0CG48 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.53□□□□□ -2.16
UBCP0CG48 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.53□□□□□ -2.16
UBCP0CG48 MTND1P8-201ENST00000571424 950 ntBASIC1.53□□□□□ -2.16
UBCP0CG48 MIR4285-201ENST00000581001 85 ntBASIC1.53□□□□□ -2.16
UBCP0CG48 RMST_6.1-201ENST00000611980 203 ntBASIC1.53□□□□□ -2.16
UBCP0CG48 AC087241.4-201ENST00000612441 480 ntBASIC1.53□□□□□ -2.16
UBCP0CG48 AC022306.3-201ENST00000619930 550 ntBASIC1.53□□□□□ -2.16
UBCP0CG48 WWP1P1-201ENST00000466609 2769 ntBASIC1.53□□□□□ -2.17
UBCP0CG48 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
UBCP0CG48 MIR449A-201ENST00000362113 91 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 snoU2_19.1-201ENST00000362361 80 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 SNORD48-201ENST00000364953 64 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 RAP1BP3-201ENST00000407180 549 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 AC114491.1-201ENST00000416095 246 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.52□□□□□ -2.17
UBCP0CG48 HMGB1P31-201ENST00000437242 427 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 AL354941.1-201ENST00000438600 464 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 AL606662.1-201ENST00000445763 553 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.52□□□□□ -2.17
UBCP0CG48 RPL30P6-201ENST00000475925 342 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 AC010587.1-201ENST00000505809 469 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 AC034244.1-201ENST00000507687 207 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 MTCYBP40-201ENST00000509390 1135 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 RNA5SP182-201ENST00000516064 82 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 SNORA44.1-201ENST00000517031 108 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
UBCP0CG48 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.52□□□□□ -2.17
UBCP0CG48 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 AC078795.2-201ENST00000602835 1252 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 AL031775.1-201ENST00000607014 887 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 RNU6-87P-201ENST00000607561 108 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 AC104010.1-201ENST00000616889 150 ntBASIC1.52□□□□□ -2.17
UBCP0CG48 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.52□□□□□ -2.17
UBCP0CG48 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
UBCP0CG48 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
UBCP0CG48 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.51□□□□□ -2.17
UBCP0CG48 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.51□□□□□ -2.17
UBCP0CG48 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
UBCP0CG48 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.51□□□□□ -2.17
UBCP0CG48 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
UBCP0CG48 SNORD56.1-201ENST00000362913 68 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 SNORD113-6-201ENST00000363345 75 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 RNU6-39P-201ENST00000384344 107 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 MIR513B-201ENST00000385136 84 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 MIR634-201ENST00000385208 97 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 MIR1294-201ENST00000408503 142 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 MTATP6P19-201ENST00000413797 659 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 TOMM20P4-201ENST00000427861 435 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 MED13P1-201ENST00000428342 171 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 RPS15AP10-201ENST00000432472 382 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 RPS24P1-201ENST00000438550 371 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 USP9YP15-201ENST00000442391 422 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.51□□□□□ -2.17
UBCP0CG48 AL360271.2-201ENST00000447710 161 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.51□□□□□ -2.17
UBCP0CG48 RPL30P12-201ENST00000474666 353 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 AC093259.1-201ENST00000509755 300 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.51□□□□□ -2.17
UBCP0CG48 PCMTD1P2-201ENST00000565017 355 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 AC104581.2-201ENST00000572227 430 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.51□□□□□ -2.17
UBCP0CG48 AL136363.2-201ENST00000604173 851 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 AC010900.2-201ENST00000604508 210 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.51□□□□□ -2.17
UBCP0CG48 AC092140.2-201ENST00000618027 521 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 RMST_7.1-201ENST00000621935 268 ntBASIC1.51□□□□□ -2.17
UBCP0CG48 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.51□□□□□ -2.17
UBCP0CG48 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
UBCP0CG48 AC106754.1-201ENST00000562632 1513 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
UBCP0CG48 CBX3P1-201ENST00000325243 554 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 SNORA24.1-201ENST00000384401 135 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 MIR9-3-201ENST00000385084 90 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 SNORA48.1-201ENST00000390879 135 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 MRPL42P2-201ENST00000403169 426 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms