Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.81□□□□□ -1.96
RB1P06400 RNU6-835P-201ENST00000516974 104 ntBASIC2.81□□□□□ -1.96
RB1P06400 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.81□□□□□ -1.96
RB1P06400 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.81□□□□□ -1.96
RB1P06400 MTCO3P23-201ENST00000561363 289 ntBASIC2.81□□□□□ -1.96
RB1P06400 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.81□□□□□ -1.96
RB1P06400 MTCO3P13-201ENST00000577757 781 ntBASIC2.81□□□□□ -1.96
RB1P06400 MIR3605-201ENST00000583214 100 ntBASIC2.81□□□□□ -1.96
RB1P06400 MIR4769-201ENST00000584126 77 ntBASIC2.81□□□□□ -1.96
RB1P06400 AL359198.2-201ENST00000611836 194 ntBASIC2.81□□□□□ -1.96
RB1P06400 uc_338.14-201ENST00000613162 166 ntBASIC2.81□□□□□ -1.96
RB1P06400 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.81□□□□□ -1.96
RB1P06400 uc_338.34-201ENST00000617467 174 ntBASIC2.81□□□□□ -1.96
RB1P06400 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.81□□□□□ -1.96
RB1P06400 AP003400.5-201ENST00000624827 617 ntBASIC2.81□□□□□ -1.96
RB1P06400 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.81□□□□□ -1.96
RB1P06400 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.81□□□□□ -1.96
RB1P06400 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RB1P06400 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
RB1P06400 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.8□□□□□ -1.96
RB1P06400 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.8□□□□□ -1.96
RB1P06400 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RB1P06400 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
RB1P06400 SNORD62.1-201ENST00000362541 86 ntBASIC2.8□□□□□ -1.96
RB1P06400 RNU6-1215P-201ENST00000384441 102 ntBASIC2.8□□□□□ -1.96
RB1P06400 Y_RNA.516-201ENST00000384541 124 ntBASIC2.8□□□□□ -1.96
RB1P06400 SNORD37.1-201ENST00000390968 65 ntBASIC2.8□□□□□ -1.96
RB1P06400 AL451074.5-201ENST00000415894 435 ntBASIC2.8□□□□□ -1.96
RB1P06400 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.8□□□□□ -1.96
RB1P06400 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.8□□□□□ -1.96
RB1P06400 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.8□□□□□ -1.96
RB1P06400 CALM1P1-201ENST00000442082 433 ntBASIC2.8□□□□□ -1.96
RB1P06400 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.8□□□□□ -1.96
RB1P06400 AL441985.1-201ENST00000457727 251 ntBASIC2.8□□□□□ -1.96
RB1P06400 RPS29P21-201ENST00000496272 170 ntBASIC2.8□□□□□ -1.96
RB1P06400 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RB1P06400 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.8□□□□□ -1.96
RB1P06400 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.8□□□□□ -1.96
RB1P06400 MTND4P7-201ENST00000523876 130 ntBASIC2.8□□□□□ -1.96
RB1P06400 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.8□□□□□ -1.96
RB1P06400 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.8□□□□□ -1.96
RB1P06400 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.8□□□□□ -1.96
RB1P06400 MIR4424-201ENST00000585257 86 ntBASIC2.8□□□□□ -1.96
RB1P06400 AL158827.2-201ENST00000602494 330 ntBASIC2.8□□□□□ -1.96
RB1P06400 AL691447.3-201ENST00000635020 330 ntBASIC2.8□□□□□ -1.96
RB1P06400 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RB1P06400 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
RB1P06400 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.8□□□□□ -1.96
RB1P06400 AC108206.1-201ENST00000570186 4159 ntBASIC2.79□□□□□ -1.96
RB1P06400 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.79□□□□□ -1.96
RB1P06400 RNU6-942P-201ENST00000363002 107 ntBASIC2.79□□□□□ -1.96
RB1P06400 RNU6-461P-201ENST00000364195 107 ntBASIC2.79□□□□□ -1.96
RB1P06400 Y_RNA.399-201ENST00000383955 105 ntBASIC2.79□□□□□ -1.96
RB1P06400 HMGN2P35-201ENST00000412164 270 ntBASIC2.79□□□□□ -1.96
RB1P06400 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.79□□□□□ -1.96
RB1P06400 AC004383.1-201ENST00000438135 289 ntBASIC2.79□□□□□ -1.96
RB1P06400 RPL39P40-201ENST00000445481 146 ntBASIC2.79□□□□□ -1.96
RB1P06400 AP001324.2-201ENST00000461163 319 ntBASIC2.79□□□□□ -1.96
RB1P06400 RPL23AP11-201ENST00000475260 469 ntBASIC2.79□□□□□ -1.96
RB1P06400 AC103975.1-201ENST00000482506 483 ntBASIC2.79□□□□□ -1.96
RB1P06400 RPL23AP70-201ENST00000483361 460 ntBASIC2.79□□□□□ -1.96
RB1P06400 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.79□□□□□ -1.96
RB1P06400 Y_RNA.704-201ENST00000516851 102 ntBASIC2.79□□□□□ -1.96
RB1P06400 BTF3P12-201ENST00000519620 469 ntBASIC2.79□□□□□ -1.96
RB1P06400 AK6P1-201ENST00000540219 478 ntBASIC2.79□□□□□ -1.96
RB1P06400 AC025165.5-201ENST00000602802 578 ntBASIC2.79□□□□□ -1.96
RB1P06400 AL670379.10-201ENST00000604330 253 ntBASIC2.79□□□□□ -1.96
RB1P06400 AL670379.9-201ENST00000605428 253 ntBASIC2.79□□□□□ -1.96
RB1P06400 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.79□□□□□ -1.96
RB1P06400 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.79□□□□□ -1.96
RB1P06400 AC026585.1-201ENST00000619582 524 ntBASIC2.79□□□□□ -1.96
RB1P06400 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
RB1P06400 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RB1P06400 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RB1P06400 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.79□□□□□ -1.96
RB1P06400 AL161431.1-201ENST00000618966 4205 ntBASIC2.79□□□□□ -1.96
RB1P06400 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RB1P06400 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.78□□□□□ -1.96
RB1P06400 RNU6-858P-201ENST00000362436 107 ntBASIC2.78□□□□□ -1.96
RB1P06400 VTRNA1-1-201ENST00000363120 99 ntBASIC2.78□□□□□ -1.96
RB1P06400 SET-203ENST00000372688 801 ntTSL 2 BASIC2.78□□□□□ -1.96
RB1P06400 Y_RNA.480-201ENST00000384364 102 ntBASIC2.78□□□□□ -1.96
RB1P06400 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.78□□□□□ -1.96
RB1P06400 RNU6-648P-201ENST00000410190 107 ntBASIC2.78□□□□□ -1.96
RB1P06400 AC003685.2-201ENST00000422795 395 ntBASIC2.78□□□□□ -1.96
RB1P06400 RPS29P6-201ENST00000438196 145 ntBASIC2.78□□□□□ -1.96
RB1P06400 Y_RNA.638-201ENST00000459374 113 ntBASIC2.78□□□□□ -1.96
RB1P06400 AL121769.1-201ENST00000469473 401 ntBASIC2.78□□□□□ -1.96
RB1P06400 MED28P2-201ENST00000475771 317 ntBASIC2.78□□□□□ -1.96
RB1P06400 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.78□□□□□ -1.96
RB1P06400 AC082651.2-201ENST00000496833 166 ntBASIC2.78□□□□□ -1.96
RB1P06400 CCDC34P1-201ENST00000507441 517 ntBASIC2.78□□□□□ -1.96
RB1P06400 RNA5SP401-201ENST00000515920 127 ntBASIC2.78□□□□□ -1.96
RB1P06400 RNU6-1281P-201ENST00000516223 105 ntBASIC2.78□□□□□ -1.96
RB1P06400 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.78□□□□□ -1.96
RB1P06400 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.78□□□□□ -1.96
RB1P06400 IGKV3-31-201ENST00000523109 329 ntBASIC2.78□□□□□ -1.96
RB1P06400 COX6CP5-201ENST00000527162 228 ntBASIC2.78□□□□□ -1.96
RB1P06400 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.78□□□□□ -1.96
RB1P06400 ZNF519P2-201ENST00000557032 169 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms