Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SPINT5P-201ENST00000448174 155 ntBASIC-0.1□□□□□ -2.43
APOBP04114 LARP1BP2-201ENST00000486594 519 ntBASIC-0.1□□□□□ -2.43
APOBP04114 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.1□□□□□ -2.43
APOBP04114 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC-0.1□□□□□ -2.43
APOBP04114 AC024257.5-201ENST00000612739 531 ntBASIC-0.1□□□□□ -2.43
APOBP04114 AC092125.1-201ENST00000562568 1995 ntBASIC-0.1□□□□□ -2.43
APOBP04114 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
APOBP04114 SNORD114-16-201ENST00000363044 70 ntBASIC-0.1□□□□□ -2.43
APOBP04114 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.1□□□□□ -2.43
APOBP04114 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
APOBP04114 RNU6-575P-201ENST00000411326 105 ntBASIC-0.1□□□□□ -2.43
APOBP04114 RPL30P7-201ENST00000479312 323 ntBASIC-0.1□□□□□ -2.43
APOBP04114 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.1□□□□□ -2.43
APOBP04114 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC-0.1□□□□□ -2.43
APOBP04114 ANKRD36BP2-206ENST00000575193 1245 ntBASIC-0.1□□□□□ -2.43
APOBP04114 AC091965.5-201ENST00000624785 342 ntBASIC-0.1□□□□□ -2.43
APOBP04114 RNU6-263P-201ENST00000363811 107 ntBASIC-0.1□□□□□ -2.43
APOBP04114 AC108740.1-201ENST00000498629 225 ntBASIC-0.1□□□□□ -2.43
APOBP04114 AC016065.2-201ENST00000514530 444 ntBASIC-0.1□□□□□ -2.43
APOBP04114 CENPUP1-201ENST00000526649 1202 ntBASIC-0.1□□□□□ -2.43
APOBP04114 MDM2-232ENST00000544561 213 ntTSL 5 BASIC-0.1□□□□□ -2.43
APOBP04114 AL157871.3-201ENST00000557231 293 ntBASIC-0.1□□□□□ -2.43
APOBP04114 AC027309.3-201ENST00000623419 351 ntBASIC-0.1□□□□□ -2.43
APOBP04114 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
APOBP04114 SNORD18A-201ENST00000363753 72 ntBASIC-0.11□□□□□ -2.43
APOBP04114 RNU4-12P-201ENST00000365233 139 ntBASIC-0.11□□□□□ -2.43
APOBP04114 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.11□□□□□ -2.43
APOBP04114 MIR218-1-201ENST00000384999 110 ntBASIC-0.11□□□□□ -2.43
APOBP04114 SSR1P1-201ENST00000407630 814 ntBASIC-0.11□□□□□ -2.43
APOBP04114 RPS26P42-201ENST00000413485 326 ntBASIC-0.11□□□□□ -2.43
APOBP04114 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC-0.11□□□□□ -2.43
APOBP04114 RPS15AP5-201ENST00000436276 388 ntBASIC-0.11□□□□□ -2.43
APOBP04114 HMGN2P34-201ENST00000437647 269 ntBASIC-0.11□□□□□ -2.43
APOBP04114 NFU1P2-201ENST00000448700 469 ntBASIC-0.11□□□□□ -2.43
APOBP04114 OR2AQ1P-201ENST00000451972 200 ntBASIC-0.11□□□□□ -2.43
APOBP04114 KATNBL1P6-201ENST00000453433 915 ntBASIC-0.11□□□□□ -2.43
APOBP04114 AC010409.1-201ENST00000487382 476 ntBASIC-0.11□□□□□ -2.43
APOBP04114 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC-0.11□□□□□ -2.43
APOBP04114 AL079343.1-201ENST00000572358 1771 ntBASIC-0.11□□□□□ -2.43
APOBP04114 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
APOBP04114 SNORD114-24-201ENST00000365029 72 ntBASIC-0.11□□□□□ -2.43
APOBP04114 RNU4-45P-201ENST00000365469 141 ntBASIC-0.11□□□□□ -2.43
APOBP04114 MIR106A-201ENST00000384870 81 ntBASIC-0.11□□□□□ -2.43
APOBP04114 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC-0.11□□□□□ -2.43
APOBP04114 SNORD116-28-201ENST00000516123 91 ntBASIC-0.11□□□□□ -2.43
APOBP04114 AP003973.1-201ENST00000604639 691 ntBASIC-0.11□□□□□ -2.43
APOBP04114 AL356157.2-201ENST00000605122 111 ntBASIC-0.11□□□□□ -2.43
APOBP04114 AC112220.3-201ENST00000605502 502 ntBASIC-0.11□□□□□ -2.43
APOBP04114 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC-0.11□□□□□ -2.43
APOBP04114 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
APOBP04114 AC040168.1-201ENST00000623594 991 ntBASIC-0.11□□□□□ -2.43
APOBP04114 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC-0.11□□□□□ -2.43
APOBP04114 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
APOBP04114 MTND4P19-201ENST00000446659 478 ntBASIC-0.11□□□□□ -2.43
APOBP04114 PDCD5P2-201ENST00000507570 312 ntBASIC-0.11□□□□□ -2.43
APOBP04114 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
APOBP04114 uc_338.15-201ENST00000615470 191 ntBASIC-0.11□□□□□ -2.43
APOBP04114 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.11□□□□□ -2.43
APOBP04114 RNU6-674P-201ENST00000363831 107 ntBASIC-0.11□□□□□ -2.43
APOBP04114 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.11□□□□□ -2.43
APOBP04114 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC-0.11□□□□□ -2.43
APOBP04114 AC111000.5-201ENST00000506559 1178 ntBASIC-0.11□□□□□ -2.43
APOBP04114 AL136520.1-202ENST00000555494 763 ntBASIC-0.11□□□□□ -2.43
APOBP04114 CYP3A52P-201ENST00000563326 91 ntBASIC-0.11□□□□□ -2.43
APOBP04114 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC-0.11□□□□□ -2.43
APOBP04114 AC010615.3-201ENST00000597319 394 ntBASIC-0.11□□□□□ -2.43
APOBP04114 AC007349.4-201ENST00000608114 532 ntBASIC-0.11□□□□□ -2.43
APOBP04114 MIR548AZ-201ENST00000616567 95 ntBASIC-0.11□□□□□ -2.43
APOBP04114 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
APOBP04114 RNU6-989P-201ENST00000362756 107 ntBASIC-0.12□□□□□ -2.43
APOBP04114 RNY3P5-201ENST00000384127 102 ntBASIC-0.12□□□□□ -2.43
APOBP04114 RNU6-360P-201ENST00000390944 104 ntBASIC-0.12□□□□□ -2.43
APOBP04114 AC096531.1-201ENST00000419107 107 ntBASIC-0.12□□□□□ -2.43
APOBP04114 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC-0.12□□□□□ -2.43
APOBP04114 MTCO2P20-201ENST00000437339 673 ntBASIC-0.12□□□□□ -2.43
APOBP04114 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC-0.12□□□□□ -2.43
APOBP04114 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.12□□□□□ -2.43
APOBP04114 AC104164.3-201ENST00000467363 1258 ntBASIC-0.12□□□□□ -2.43
APOBP04114 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.12□□□□□ -2.43
APOBP04114 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.12□□□□□ -2.43
APOBP04114 RNU4-5P-201ENST00000607255 135 ntBASIC-0.12□□□□□ -2.43
APOBP04114 AC008498.1-201ENST00000613012 531 ntBASIC-0.12□□□□□ -2.43
APOBP04114 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
APOBP04114 RNA5SP327-201ENST00000362494 101 ntBASIC-0.12□□□□□ -2.43
APOBP04114 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.12□□□□□ -2.43
APOBP04114 AL589655.1-201ENST00000405398 482 ntBASIC-0.12□□□□□ -2.43
APOBP04114 GTF2IP20-201ENST00000431663 360 ntBASIC-0.12□□□□□ -2.43
APOBP04114 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC-0.12□□□□□ -2.43
APOBP04114 AC006512.1-201ENST00000468816 291 ntBASIC-0.12□□□□□ -2.43
APOBP04114 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
APOBP04114 AC013468.1-201ENST00000608680 598 ntBASIC-0.12□□□□□ -2.43
APOBP04114 RNA5SP275-201ENST00000363936 118 ntBASIC-0.12□□□□□ -2.43
APOBP04114 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
APOBP04114 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC-0.12□□□□□ -2.43
APOBP04114 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
APOBP04114 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC-0.12□□□□□ -2.43
APOBP04114 AC015849.6-201ENST00000605454 474 ntBASIC-0.12□□□□□ -2.43
APOBP04114 AC021506.2-201ENST00000612354 169 ntBASIC-0.12□□□□□ -2.43
APOBP04114 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.12□□□□□ -2.43
APOBP04114 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms