Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.14□□□□□ -2.23
COL4A1P02462 MIR3146-201ENST00000580367 79 ntBASIC1.14□□□□□ -2.23
COL4A1P02462 AC245884.10-201ENST00000597355 337 ntBASIC1.14□□□□□ -2.23
COL4A1P02462 BNIP3P23-201ENST00000599655 511 ntBASIC1.14□□□□□ -2.23
COL4A1P02462 AL109918.3-201ENST00000603072 338 ntBASIC1.14□□□□□ -2.23
COL4A1P02462 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
COL4A1P02462 AC144521.1-201ENST00000607148 956 ntBASIC1.14□□□□□ -2.23
COL4A1P02462 AL355816.2-201ENST00000610049 647 ntBASIC1.14□□□□□ -2.23
COL4A1P02462 AC011939.3-201ENST00000613686 466 ntBASIC1.14□□□□□ -2.23
COL4A1P02462 AC068787.1-201ENST00000623908 691 ntBASIC1.14□□□□□ -2.23
COL4A1P02462 AC091812.1-201ENST00000432235 1948 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 RNU5E-6P-201ENST00000365574 115 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
COL4A1P02462 CISD1P1-201ENST00000393907 327 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 RPS20P2-201ENST00000402520 389 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 NDUFS5P4-201ENST00000412983 318 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AL008987.1-201ENST00000415528 237 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 EBAG9P1-201ENST00000418955 543 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC098614.2-201ENST00000426040 255 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 ISCA1P1-201ENST00000426679 387 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 MTCYBP39-201ENST00000437562 491 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AL354941.1-201ENST00000438600 464 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 AP000542.1-201ENST00000448473 371 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.13□□□□□ -2.23
COL4A1P02462 RPL23AP35-201ENST00000451906 501 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC093899.1-201ENST00000457984 376 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 EIF4EP3-201ENST00000498782 656 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC022447.1-201ENST00000515358 464 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 Y_RNA.689-201ENST00000516589 107 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.13□□□□□ -2.23
COL4A1P02462 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC090888.1-201ENST00000561335 1141 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC008751.2-201ENST00000597885 980 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC011458.1-201ENST00000604034 617 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC008498.1-201ENST00000613012 531 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AL607023.1-201ENST00000620045 248 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.13□□□□□ -2.23
COL4A1P02462 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.13□□□□□ -2.23
COL4A1P02462 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
COL4A1P02462 RNU6-1167P-201ENST00000363227 94 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 U8.3-201ENST00000363321 132 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 SNORD113-6-201ENST00000363345 75 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 RNA5SP457-201ENST00000363657 124 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 RNU6-1280P-201ENST00000365211 107 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
COL4A1P02462 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
COL4A1P02462 AL512604.1-201ENST00000404812 257 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 RAC1P6-201ENST00000423911 575 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AL353777.1-201ENST00000425552 326 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.13□□□□□ -2.23
COL4A1P02462 AL590383.1-201ENST00000428602 75 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 GPM6BP2-201ENST00000432046 144 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 MTND4P25-201ENST00000441039 533 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 GPM6BP1-201ENST00000446387 144 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 NDUFB4P2-201ENST00000509515 391 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 MTND5P13-201ENST00000513046 1079 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.13□□□□□ -2.23
COL4A1P02462 RNU5F-8P-201ENST00000515941 111 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 SNORA31.3-201ENST00000516029 96 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 RNU6-581P-201ENST00000516214 105 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 RNU2-10P-201ENST00000516375 211 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 Y_RNA.681-201ENST00000516445 113 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 RNU5B-3P-201ENST00000516601 115 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 SNORD19.2-201ENST00000516978 73 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 RNA5SP337-201ENST00000517007 109 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 RNU6-64P-201ENST00000517119 105 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC068587.4-201ENST00000533893 186 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC093012.1-202ENST00000549403 582 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.13□□□□□ -2.23
COL4A1P02462 AC008749.1-201ENST00000597650 306 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC025165.5-201ENST00000602802 578 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC112187.2-201ENST00000604345 283 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms