Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SNORA43.2-201ENST00000516652 128 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.57□□□□□ -2.16
HLA-DQA1P01909 CYCSP26-201ENST00000534107 320 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DQA1P01909 OSBPL9P5-201ENST00000542581 171 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.57□□□□□ -2.16
HLA-DQA1P01909 MIR3122-201ENST00000577243 73 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 RPL30P11-203ENST00000598995 310 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AC012493.3-201ENST00000604494 112 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AC121247.2-201ENST00000604776 136 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AC098614.4-201ENST00000607601 462 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AC096772.1-201ENST00000609146 564 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AC073114.1-201ENST00000612027 490 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 AC022202.1-201ENST00000613515 211 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 RMST_7.1-201ENST00000621935 268 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 U6.114-201ENST00000636407 96 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 MIR3529-201ENST00000637713 78 ntBASIC1.57□□□□□ -2.16
HLA-DQA1P01909 RNU6-1287P-201ENST00000362914 107 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 RNU6-181P-201ENST00000363225 107 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 RNU6-108P-201ENST00000365558 107 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 RNU6-622P-201ENST00000384272 103 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 RNU6-1060P-201ENST00000384664 107 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 MIR454-201ENST00000390180 115 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 AL591034.2-201ENST00000402839 359 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.56□□□□□ -2.16
HLA-DQA1P01909 RNU2-3P-201ENST00000410144 191 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 RN7SKP158-201ENST00000410453 326 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 RNU2-63P-201ENST00000410792 194 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 RN7SKP142-201ENST00000411236 328 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 RNU6-387P-201ENST00000411331 105 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 AC074117.2-201ENST00000417130 397 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HLA-DQA1P01909 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DQA1P01909 HMGB1P31-201ENST00000437242 427 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 AC018634.1-201ENST00000437554 401 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.56□□□□□ -2.16
HLA-DQA1P01909 AC124916.1-201ENST00000444020 547 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 AC079781.2-201ENST00000446424 169 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 AC079448.1-201ENST00000449377 373 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 AC012308.1-201ENST00000451232 178 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HLA-DQA1P01909 CKS1BP2-201ENST00000497342 240 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 MTCO3P9-201ENST00000506989 781 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DQA1P01909 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DQA1P01909 RNU7-193P-201ENST00000516723 65 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 RNU6-445P-201ENST00000516949 107 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 AP003072.2-201ENST00000527756 676 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DQA1P01909 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DQA1P01909 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.56□□□□□ -2.16
HLA-DQA1P01909 PSMA3P-201ENST00000555485 635 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 MIR5692A1-201ENST00000580523 69 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 AC040904.1-201ENST00000590850 223 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 AC245014.2-201ENST00000603689 287 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 AC246785.4-201ENST00000605374 287 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 CTSLP2-204ENST00000629029 392 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.56□□□□□ -2.16
HLA-DQA1P01909 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HLA-DQA1P01909 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
HLA-DQA1P01909 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HLA-DQA1P01909 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HLA-DQA1P01909 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HLA-DQA1P01909 RNU6-1097P-201ENST00000363586 107 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 U3.12-201ENST00000364498 214 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 SNORD116-8-201ENST00000384365 95 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 RNU1-57P-201ENST00000384491 166 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 RNU6-456P-201ENST00000384493 107 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 MIR186-201ENST00000384988 86 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 MIR17-201ENST00000385012 84 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 MIR95-201ENST00000385072 81 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 BTF3P7-201ENST00000407097 488 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 RNA5SP489-201ENST00000410986 109 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 PIGFP2-201ENST00000421400 651 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 USP9YP8-201ENST00000441913 500 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 USP9YP29-201ENST00000445112 563 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 RPS29P15-201ENST00000458329 171 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DQA1P01909 RNU2-53P-201ENST00000516257 147 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 SNORD27.1-201ENST00000516319 72 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 MIR514B-201ENST00000516774 80 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.55□□□□□ -2.16
HLA-DQA1P01909 AC118273.2-201ENST00000532092 465 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 MIR3162-201ENST00000581818 82 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 AC073410.2-201ENST00000603240 332 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 Z99497.2-201ENST00000603634 310 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 AC046143.2-201ENST00000609789 160 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 AL161423.1-201ENST00000613700 262 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 uc_338.15-201ENST00000615470 191 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 U4atac.1-201ENST00000618345 95 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 AC026585.1-201ENST00000619582 524 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 MIR6873-201ENST00000622788 63 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 AC078883.4-201ENST00000623218 367 ntBASIC1.55□□□□□ -2.16
HLA-DQA1P01909 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
HLA-DQA1P01909 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.55□□□□□ -2.16
HLA-DQA1P01909 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.55□□□□□ -2.16
HLA-DQA1P01909 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.55□□□□□ -2.16
HLA-DQA1P01909 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DQA1P01909 Y_RNA.40-201ENST00000362645 93 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 RNU6-1010P-201ENST00000362757 107 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms