Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL589872.1-201ENST00000426602 288 ntBASIC0.42□□□□□ -2.34
TNFP01375 AL096829.2-201ENST00000446582 742 ntBASIC0.42□□□□□ -2.34
TNFP01375 AL050341.1-201ENST00000447743 313 ntBASIC0.42□□□□□ -2.34
TNFP01375 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.42□□□□□ -2.34
TNFP01375 BET1P1-201ENST00000482276 359 ntBASIC0.42□□□□□ -2.34
TNFP01375 RPL30P1-201ENST00000488676 339 ntBASIC0.42□□□□□ -2.34
TNFP01375 AC093519.1-201ENST00000566109 298 ntBASIC0.42□□□□□ -2.34
TNFP01375 AC093249.1-201ENST00000567049 203 ntBASIC0.42□□□□□ -2.34
TNFP01375 AC112220.2-201ENST00000605513 533 ntBASIC0.42□□□□□ -2.34
TNFP01375 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.42□□□□□ -2.34
TNFP01375 AC080188.3-201ENST00000624842 748 ntBASIC0.42□□□□□ -2.34
TNFP01375 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.42□□□□□ -2.34
TNFP01375 SGO1P1-201ENST00000603525 1447 ntBASIC0.41□□□□□ -2.34
TNFP01375 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
TNFP01375 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.41□□□□□ -2.34
TNFP01375 RPS26P5-201ENST00000418544 335 ntBASIC0.41□□□□□ -2.34
TNFP01375 AC093422.3-201ENST00000428506 305 ntBASIC0.41□□□□□ -2.34
TNFP01375 AC092989.1-201ENST00000481235 277 ntBASIC0.41□□□□□ -2.34
TNFP01375 TRBVA-201ENST00000498804 316 ntBASIC0.41□□□□□ -2.34
TNFP01375 PDCD5P2-201ENST00000507570 312 ntBASIC0.41□□□□□ -2.34
TNFP01375 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.41□□□□□ -2.34
TNFP01375 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.41□□□□□ -2.34
TNFP01375 TRAV32-201ENST00000553993 340 ntBASIC0.41□□□□□ -2.34
TNFP01375 BNIP3P24-201ENST00000593398 557 ntBASIC0.41□□□□□ -2.34
TNFP01375 VN1R82P-201ENST00000601481 356 ntBASIC0.41□□□□□ -2.34
TNFP01375 AC034229.4-201ENST00000607861 441 ntBASIC0.41□□□□□ -2.34
TNFP01375 AC010133.1-201ENST00000615809 842 ntBASIC0.41□□□□□ -2.34
TNFP01375 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
TNFP01375 VTRNA1-3-201ENST00000365645 89 ntBASIC0.4□□□□□ -2.35
TNFP01375 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
TNFP01375 MIR16-1-201ENST00000385271 89 ntBASIC0.4□□□□□ -2.35
TNFP01375 TMSB4XP8-201ENST00000402089 135 ntBASIC0.4□□□□□ -2.35
TNFP01375 AL592310.1-201ENST00000414330 671 ntBASIC0.4□□□□□ -2.35
TNFP01375 TMSB4XP6-201ENST00000415187 135 ntBASIC0.4□□□□□ -2.35
TNFP01375 AC092634.6-201ENST00000418558 192 ntBASIC0.4□□□□□ -2.35
TNFP01375 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.4□□□□□ -2.35
TNFP01375 SNX2P2-201ENST00000424553 323 ntBASIC0.4□□□□□ -2.35
TNFP01375 TMSB4XP1-201ENST00000424567 135 ntBASIC0.4□□□□□ -2.35
TNFP01375 AC010153.1-201ENST00000432862 727 ntBASIC0.4□□□□□ -2.35
TNFP01375 AC092170.1-201ENST00000440211 356 ntBASIC0.4□□□□□ -2.35
TNFP01375 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.4□□□□□ -2.35
TNFP01375 RPS20P10-201ENST00000451209 253 ntBASIC0.4□□□□□ -2.35
TNFP01375 AL583843.1-201ENST00000456070 346 ntBASIC0.4□□□□□ -2.35
TNFP01375 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.4□□□□□ -2.35
TNFP01375 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.4□□□□□ -2.35
TNFP01375 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.4□□□□□ -2.35
TNFP01375 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.4□□□□□ -2.35
TNFP01375 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.4□□□□□ -2.35
TNFP01375 AC096772.1-201ENST00000609146 564 ntBASIC0.4□□□□□ -2.35
TNFP01375 AC040896.1-201ENST00000613819 479 ntBASIC0.4□□□□□ -2.35
TNFP01375 MIR6779-201ENST00000617283 64 ntBASIC0.4□□□□□ -2.35
TNFP01375 AC095038.3-201ENST00000634439 195 ntBASIC0.4□□□□□ -2.35
TNFP01375 AC092447.10-201ENST00000620607 1652 ntBASIC0.4□□□□□ -2.35
TNFP01375 RNU6-619P-201ENST00000365146 108 ntBASIC0.39□□□□□ -2.35
TNFP01375 RNU6-1280P-201ENST00000365211 107 ntBASIC0.39□□□□□ -2.35
TNFP01375 SNORD116-23-201ENST00000384645 92 ntBASIC0.39□□□□□ -2.35
TNFP01375 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.39□□□□□ -2.35
TNFP01375 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.39□□□□□ -2.35
TNFP01375 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.39□□□□□ -2.35
TNFP01375 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
TNFP01375 MTND3P4-201ENST00000453537 303 ntBASIC0.39□□□□□ -2.35
TNFP01375 AC048346.1-201ENST00000510247 144 ntBASIC0.39□□□□□ -2.35
TNFP01375 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.39□□□□□ -2.35
TNFP01375 RNA5SP121-201ENST00000516537 101 ntBASIC0.39□□□□□ -2.35
TNFP01375 RNU6-703P-201ENST00000516946 107 ntBASIC0.39□□□□□ -2.35
TNFP01375 AC090142.3-201ENST00000519012 385 ntBASIC0.39□□□□□ -2.35
TNFP01375 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.39□□□□□ -2.35
TNFP01375 AC090502.2-201ENST00000549267 280 ntBASIC0.39□□□□□ -2.35
TNFP01375 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.39□□□□□ -2.35
TNFP01375 MIR1273G-201ENST00000577677 100 ntBASIC0.39□□□□□ -2.35
TNFP01375 AC012065.4-201ENST00000602445 679 ntBASIC0.39□□□□□ -2.35
TNFP01375 RNU6-91P-201ENST00000607774 107 ntBASIC0.39□□□□□ -2.35
TNFP01375 AC009229.3-201ENST00000608056 282 ntBASIC0.39□□□□□ -2.35
TNFP01375 AC096586.1-201ENST00000610267 561 ntBASIC0.39□□□□□ -2.35
TNFP01375 AC068205.3-201ENST00000636385 468 ntBASIC0.39□□□□□ -2.35
TNFP01375 RNA5SP493-201ENST00000364115 91 ntBASIC0.38□□□□□ -2.35
TNFP01375 RNU6-743P-201ENST00000364151 106 ntBASIC0.38□□□□□ -2.35
TNFP01375 RNU4-41P-201ENST00000364426 143 ntBASIC0.38□□□□□ -2.35
TNFP01375 RNU6-657P-201ENST00000383904 107 ntBASIC0.38□□□□□ -2.35
TNFP01375 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
TNFP01375 RNU2-28P-201ENST00000410457 189 ntBASIC0.38□□□□□ -2.35
TNFP01375 VN1R42P-201ENST00000424651 344 ntBASIC0.38□□□□□ -2.35
TNFP01375 AC008267.5-201ENST00000424928 265 ntBASIC0.38□□□□□ -2.35
TNFP01375 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.38□□□□□ -2.35
TNFP01375 AC013267.1-201ENST00000458227 267 ntBASIC0.38□□□□□ -2.35
TNFP01375 AC116655.1-201ENST00000508324 901 ntBASIC0.38□□□□□ -2.35
TNFP01375 AC010460.2-201ENST00000509054 677 ntBASIC0.38□□□□□ -2.35
TNFP01375 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.38□□□□□ -2.35
TNFP01375 RNU4-54P-201ENST00000516428 129 ntBASIC0.38□□□□□ -2.35
TNFP01375 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.38□□□□□ -2.35
TNFP01375 AC104229.1-201ENST00000561364 255 ntBASIC0.38□□□□□ -2.35
TNFP01375 AC015688.6-201ENST00000577737 104 ntBASIC0.38□□□□□ -2.35
TNFP01375 AP003465.2-201ENST00000602571 373 ntBASIC0.38□□□□□ -2.35
TNFP01375 AL355802.4-201ENST00000607635 548 ntBASIC0.38□□□□□ -2.35
TNFP01375 AC130454.1-201ENST00000622948 401 ntBASIC0.38□□□□□ -2.35
TNFP01375 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.38□□□□□ -2.35
TNFP01375 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
TNFP01375 Y_RNA.255-201ENST00000364581 97 ntBASIC0.37□□□□□ -2.35
TNFP01375 SNORD114-24-201ENST00000365029 72 ntBASIC0.37□□□□□ -2.35
TNFP01375 RNU6-1274P-201ENST00000384557 107 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms