Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RN7SKP220-201ENST00000410611 288 ntBASIC2.86□□□□□ -1.95
LDLRP01130 RNU4-14P-201ENST00000410858 122 ntBASIC2.86□□□□□ -1.95
LDLRP01130 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.86□□□□□ -1.95
LDLRP01130 CALM2P2-201ENST00000428512 440 ntBASIC2.86□□□□□ -1.95
LDLRP01130 AL591704.1-201ENST00000432574 275 ntBASIC2.86□□□□□ -1.95
LDLRP01130 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.86□□□□□ -1.95
LDLRP01130 RPS3AP52-201ENST00000435639 297 ntBASIC2.86□□□□□ -1.95
LDLRP01130 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.86□□□□□ -1.95
LDLRP01130 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.86□□□□□ -1.95
LDLRP01130 AC104058.1-201ENST00000448028 297 ntBASIC2.86□□□□□ -1.95
LDLRP01130 AC007547.1-201ENST00000462177 490 ntBASIC2.86□□□□□ -1.95
LDLRP01130 RPS29P20-201ENST00000489592 171 ntBASIC2.86□□□□□ -1.95
LDLRP01130 FAM206BP-201ENST00000510179 541 ntBASIC2.86□□□□□ -1.95
LDLRP01130 RNU6-1315P-201ENST00000517187 99 ntBASIC2.86□□□□□ -1.95
LDLRP01130 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.86□□□□□ -1.95
LDLRP01130 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.86□□□□□ -1.95
LDLRP01130 BNIP3P6-201ENST00000549284 499 ntBASIC2.86□□□□□ -1.95
LDLRP01130 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.86□□□□□ -1.95
LDLRP01130 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.86□□□□□ -1.95
LDLRP01130 POLR3GP2-201ENST00000588366 668 ntBASIC2.86□□□□□ -1.95
LDLRP01130 AP001486.3-201ENST00000615334 372 ntBASIC2.86□□□□□ -1.95
LDLRP01130 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
LDLRP01130 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.86□□□□□ -1.95
LDLRP01130 AL136360.1-201ENST00000503377 1900 ntBASIC2.85□□□□□ -1.95
LDLRP01130 HSPA8P4-201ENST00000511877 1920 ntBASIC2.85□□□□□ -1.95
LDLRP01130 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.85□□□□□ -1.95
LDLRP01130 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
LDLRP01130 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LDLRP01130 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.85□□□□□ -1.95
LDLRP01130 U3.12-201ENST00000364498 214 ntBASIC2.85□□□□□ -1.95
LDLRP01130 Y_RNA.259-201ENST00000364619 101 ntBASIC2.85□□□□□ -1.95
LDLRP01130 Y_RNA.387-201ENST00000383918 102 ntBASIC2.85□□□□□ -1.95
LDLRP01130 SNORD116-29-201ENST00000384516 83 ntBASIC2.85□□□□□ -1.95
LDLRP01130 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.85□□□□□ -1.95
LDLRP01130 MIR887-201ENST00000401258 79 ntBASIC2.85□□□□□ -1.95
LDLRP01130 RNU6-1025P-201ENST00000410629 104 ntBASIC2.85□□□□□ -1.95
LDLRP01130 AC009161.1-201ENST00000417306 376 ntBASIC2.85□□□□□ -1.95
LDLRP01130 RPL7P10-201ENST00000417407 739 ntBASIC2.85□□□□□ -1.95
LDLRP01130 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.85□□□□□ -1.95
LDLRP01130 HMGN2P30-201ENST00000423237 256 ntBASIC2.85□□□□□ -1.95
LDLRP01130 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.85□□□□□ -1.95
LDLRP01130 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.85□□□□□ -1.95
LDLRP01130 BRK1P2-201ENST00000442875 223 ntBASIC2.85□□□□□ -1.95
LDLRP01130 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.85□□□□□ -1.95
LDLRP01130 UBBP3-201ENST00000445497 241 ntBASIC2.85□□□□□ -1.95
LDLRP01130 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.85□□□□□ -1.95
LDLRP01130 PPP1R2P5-201ENST00000457256 603 ntBASIC2.85□□□□□ -1.95
LDLRP01130 Y_RNA.639-201ENST00000458981 102 ntBASIC2.85□□□□□ -1.95
LDLRP01130 RNU7-66P-201ENST00000459469 62 ntBASIC2.85□□□□□ -1.95
LDLRP01130 AC005741.1-201ENST00000511094 432 ntBASIC2.85□□□□□ -1.95
LDLRP01130 RN7SKP256-201ENST00000517201 314 ntBASIC2.85□□□□□ -1.95
LDLRP01130 RPL7P20-201ENST00000520308 745 ntBASIC2.85□□□□□ -1.95
LDLRP01130 AC025755.1-201ENST00000521306 278 ntBASIC2.85□□□□□ -1.95
LDLRP01130 AP003122.3-201ENST00000526316 255 ntBASIC2.85□□□□□ -1.95
LDLRP01130 AC084851.1-201ENST00000529105 249 ntBASIC2.85□□□□□ -1.95
LDLRP01130 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.85□□□□□ -1.95
LDLRP01130 AL118558.2-201ENST00000556294 238 ntBASIC2.85□□□□□ -1.95
LDLRP01130 AC007151.1-201ENST00000572774 483 ntBASIC2.85□□□□□ -1.95
LDLRP01130 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.85□□□□□ -1.95
LDLRP01130 AC078899.3-201ENST00000599065 212 ntBASIC2.85□□□□□ -1.95
LDLRP01130 SNRPGP17-201ENST00000603780 214 ntBASIC2.85□□□□□ -1.95
LDLRP01130 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.85□□□□□ -1.95
LDLRP01130 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.85□□□□□ -1.95
LDLRP01130 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.85□□□□□ -1.95
LDLRP01130 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.85□□□□□ -1.95
LDLRP01130 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LDLRP01130 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LDLRP01130 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LDLRP01130 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.84□□□□□ -1.95
LDLRP01130 AC099654.7-201ENST00000635788 2127 ntBASIC2.84□□□□□ -1.95
LDLRP01130 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LDLRP01130 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LDLRP01130 MIR369-201ENST00000362155 70 ntBASIC2.84□□□□□ -1.95
LDLRP01130 Y_RNA.339-201ENST00000365325 102 ntBASIC2.84□□□□□ -1.95
LDLRP01130 Y_RNA.384-201ENST00000383909 102 ntBASIC2.84□□□□□ -1.95
LDLRP01130 RNU6-198P-201ENST00000384258 104 ntBASIC2.84□□□□□ -1.95
LDLRP01130 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
LDLRP01130 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LDLRP01130 RPL21P75-201ENST00000396599 483 ntBASIC2.84□□□□□ -1.95
LDLRP01130 RPL21P28-201ENST00000401418 483 ntBASIC2.84□□□□□ -1.95
LDLRP01130 AL592114.1-201ENST00000403842 483 ntBASIC2.84□□□□□ -1.95
LDLRP01130 MIR548P-201ENST00000408336 84 ntBASIC2.84□□□□□ -1.95
LDLRP01130 RNU2-29P-201ENST00000410423 189 ntBASIC2.84□□□□□ -1.95
LDLRP01130 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.84□□□□□ -1.95
LDLRP01130 NCOR1P3-201ENST00000420479 303 ntBASIC2.84□□□□□ -1.95
LDLRP01130 GTF2IP13-201ENST00000438487 386 ntBASIC2.84□□□□□ -1.95
LDLRP01130 RPL21P39-201ENST00000463605 483 ntBASIC2.84□□□□□ -1.95
LDLRP01130 RPL23AP11-201ENST00000475260 469 ntBASIC2.84□□□□□ -1.95
LDLRP01130 RPL21P99-201ENST00000480369 423 ntBASIC2.84□□□□□ -1.95
LDLRP01130 RPL21P93-201ENST00000480465 489 ntBASIC2.84□□□□□ -1.95
LDLRP01130 AC087190.1-201ENST00000484462 480 ntBASIC2.84□□□□□ -1.95
LDLRP01130 AC093591.1-201ENST00000491435 481 ntBASIC2.84□□□□□ -1.95
LDLRP01130 RPL21P16-201ENST00000495531 483 ntBASIC2.84□□□□□ -1.95
LDLRP01130 AC009901.1-201ENST00000506703 541 ntBASIC2.84□□□□□ -1.95
LDLRP01130 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.84□□□□□ -1.95
LDLRP01130 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.84□□□□□ -1.95
LDLRP01130 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.84□□□□□ -1.95
LDLRP01130 RNU4-29P-201ENST00000515943 174 ntBASIC2.84□□□□□ -1.95
LDLRP01130 RNA5SP76-201ENST00000516277 87 ntBASIC2.84□□□□□ -1.95
LDLRP01130 AC009812.2-201ENST00000517657 457 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms