Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 Y_RNA.555-201ENST00000384673 110 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 MIR93-201ENST00000385024 80 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CNOT4O95628 RNA5SP44-201ENST00000410446 133 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 Y_RNA.623-201ENST00000411128 95 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 HSPE1P12-201ENST00000412576 301 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.67□□□□□ -1.82
CNOT4O95628 SDAD1P3-201ENST00000427380 333 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 FABP5P15-201ENST00000453566 214 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 AC098869.1-201ENST00000481627 292 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 RN7SL271P-201ENST00000487601 295 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 RPL21P13-201ENST00000488305 481 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.67□□□□□ -1.82
CNOT4O95628 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.67□□□□□ -1.82
CNOT4O95628 AC067942.3-201ENST00000512025 362 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 RNU6-928P-201ENST00000516876 104 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 RNA5SP290-201ENST00000517133 127 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.67□□□□□ -1.82
CNOT4O95628 AL590705.4-201ENST00000532209 134 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 AP000867.2-201ENST00000532468 320 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 AC103996.1-201ENST00000555468 102 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 AL137100.2-201ENST00000555786 315 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 AC008121.1-201ENST00000603244 268 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 AL139395.1-201ENST00000603662 160 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 AC006077.1-201ENST00000604746 343 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 AL161629.2-201ENST00000615347 275 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 RLIMP1-201ENST00000339626 1680 ntBASIC3.67□□□□□ -1.82
CNOT4O95628 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNOT4O95628 AC110774.1-201ENST00000623567 2018 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CNOT4O95628 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.66□□□□□ -1.82
CNOT4O95628 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
CNOT4O95628 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNOT4O95628 MIR335-201ENST00000362173 94 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 SNORA14A-201ENST00000364773 135 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 SNORA70.4-201ENST00000365509 134 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CNOT4O95628 RNU6-338P-201ENST00000383888 105 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 Y_RNA.458-201ENST00000384240 102 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 Y_RNA.539-201ENST00000384635 107 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 MIR10A-201ENST00000385043 110 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNOT4O95628 MTCYBP2-201ENST00000407745 171 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 SNORA11.1-201ENST00000408133 129 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 RPL23AP82-202ENST00000427528 469 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 MTND3P9-201ENST00000429526 346 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 AL627311.1-201ENST00000431514 115 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 AC007389.2-201ENST00000434630 306 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 AL353748.1-201ENST00000440753 474 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 HIGD1AP2-201ENST00000446367 280 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 AK3P2-201ENST00000507976 429 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 SNORA31.6-201ENST00000516241 130 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 RNU6-612P-201ENST00000516909 102 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 SNORA81.3-201ENST00000517283 198 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 AC109479.2-201ENST00000517842 174 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.66□□□□□ -1.82
CNOT4O95628 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.66□□□□□ -1.82
CNOT4O95628 RN7SL600P-201ENST00000581811 299 ntBASIC3.66□□□□□ -1.82
CNOT4O95628 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CNOT4O95628 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNOT4O95628 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.65□□□□□ -1.82
CNOT4O95628 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CNOT4O95628 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.65□□□□□ -1.82
CNOT4O95628 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.65□□□□□ -1.82
CNOT4O95628 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
CNOT4O95628 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.65□□□□□ -1.82
CNOT4O95628 AL391987.6-201ENST00000305671 199 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CNOT4O95628 U3.6-201ENST00000363622 211 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 SNORD74.4-201ENST00000364129 80 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 Y_RNA.237-201ENST00000364439 102 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 Y_RNA.245-201ENST00000364493 95 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 U3.13-201ENST00000364804 214 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 RNU6-1035P-201ENST00000384477 107 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 MIR200C-201ENST00000384980 68 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 MIR513A2-201ENST00000385249 127 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 RPL21P17-201ENST00000397467 475 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 RNU6ATAC-201ENST00000408749 126 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.65□□□□□ -1.83
CNOT4O95628 MTCO3P29-201ENST00000432119 779 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.65□□□□□ -1.83
CNOT4O95628 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.65□□□□□ -1.83
CNOT4O95628 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.65□□□□□ -1.83
CNOT4O95628 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.65□□□□□ -1.83
CNOT4O95628 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CNOT4O95628 AC079354.2-201ENST00000453523 154 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 AL139109.1-201ENST00000455491 297 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 PRELID3BP1-201ENST00000457142 540 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 RN7SKP210-201ENST00000459176 261 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 RNU6-406P-201ENST00000516470 107 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 RNU5B-3P-201ENST00000516601 115 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.65□□□□□ -1.83
CNOT4O95628 HIGD1AP1-201ENST00000550979 275 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 AC022655.2-201ENST00000577280 318 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.65□□□□□ -1.83
CNOT4O95628 SRGNP1-201ENST00000603392 451 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 AC010900.2-201ENST00000604508 210 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 MIR432-201ENST00000606207 94 ntBASIC3.65□□□□□ -1.83
CNOT4O95628 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms