Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 CYCTP-201ENST00000504253 315 ntBASIC0.16□□□□□ -2.38
POLR1AO95602 CYCSP27-201ENST00000527643 293 ntBASIC0.16□□□□□ -2.38
POLR1AO95602 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.16□□□□□ -2.38
POLR1AO95602 AL022067.1-201ENST00000602426 454 ntBASIC0.16□□□□□ -2.38
POLR1AO95602 AC135803.1-201ENST00000608748 565 ntBASIC0.16□□□□□ -2.38
POLR1AO95602 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.16□□□□□ -2.38
POLR1AO95602 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.16□□□□□ -2.38
POLR1AO95602 AL138713.1-201ENST00000624026 2130 ntBASIC0.15□□□□□ -2.39
POLR1AO95602 Y_RNA.255-201ENST00000364581 97 ntBASIC0.15□□□□□ -2.39
POLR1AO95602 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.15□□□□□ -2.39
POLR1AO95602 FO393419.3-201ENST00000428741 282 ntBASIC0.15□□□□□ -2.39
POLR1AO95602 HSPE1P9-201ENST00000440046 311 ntBASIC0.15□□□□□ -2.39
POLR1AO95602 AL441985.1-201ENST00000457727 251 ntBASIC0.15□□□□□ -2.39
POLR1AO95602 RPL31P3-201ENST00000458430 332 ntBASIC0.15□□□□□ -2.39
POLR1AO95602 snoU13.19-201ENST00000459148 104 ntBASIC0.15□□□□□ -2.39
POLR1AO95602 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.15□□□□□ -2.39
POLR1AO95602 SMURF2P1-201ENST00000514992 481 ntBASIC0.15□□□□□ -2.39
POLR1AO95602 TRAV32-201ENST00000553993 340 ntBASIC0.15□□□□□ -2.39
POLR1AO95602 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.15□□□□□ -2.39
POLR1AO95602 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.15□□□□□ -2.39
POLR1AO95602 AC119751.3-201ENST00000399720 670 ntBASIC0.14□□□□□ -2.39
POLR1AO95602 AL356776.1-201ENST00000406574 447 ntBASIC0.14□□□□□ -2.39
POLR1AO95602 AC078974.1-201ENST00000411597 223 ntBASIC0.14□□□□□ -2.39
POLR1AO95602 AC127391.1-201ENST00000411737 98 ntBASIC0.14□□□□□ -2.39
POLR1AO95602 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.14□□□□□ -2.39
POLR1AO95602 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.14□□□□□ -2.39
POLR1AO95602 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.14□□□□□ -2.39
POLR1AO95602 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.14□□□□□ -2.39
POLR1AO95602 AC022483.1-201ENST00000514020 567 ntBASIC0.14□□□□□ -2.39
POLR1AO95602 SNORA25.11-201ENST00000515935 105 ntBASIC0.14□□□□□ -2.39
POLR1AO95602 AC012213.3-201ENST00000577199 777 ntBASIC0.14□□□□□ -2.39
POLR1AO95602 AL031176.1-201ENST00000604554 466 ntBASIC0.14□□□□□ -2.39
POLR1AO95602 MTND4P14-201ENST00000435799 1354 ntBASIC0.14□□□□□ -2.39
POLR1AO95602 MIR411-201ENST00000362239 96 ntBASIC0.13□□□□□ -2.39
POLR1AO95602 RNU6-923P-201ENST00000364753 107 ntBASIC0.13□□□□□ -2.39
POLR1AO95602 NDUFS5P4-201ENST00000412983 318 ntBASIC0.13□□□□□ -2.39
POLR1AO95602 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.13□□□□□ -2.39
POLR1AO95602 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
POLR1AO95602 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.13□□□□□ -2.39
POLR1AO95602 MIR4768-201ENST00000585270 74 ntBASIC0.13□□□□□ -2.39
POLR1AO95602 AC022432.1-201ENST00000595739 310 ntBASIC0.13□□□□□ -2.39
POLR1AO95602 AL713866.2-201ENST00000603579 219 ntBASIC0.13□□□□□ -2.39
POLR1AO95602 AC004775.1-201ENST00000607389 753 ntBASIC0.13□□□□□ -2.39
POLR1AO95602 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
POLR1AO95602 RNU6-167P-201ENST00000384292 106 ntBASIC0.13□□□□□ -2.39
POLR1AO95602 RNU6-1237P-201ENST00000384777 107 ntBASIC0.13□□□□□ -2.39
POLR1AO95602 DBF4P1-201ENST00000412976 1892 ntBASIC0.13□□□□□ -2.39
POLR1AO95602 MEMO1P3-201ENST00000459811 302 ntBASIC0.13□□□□□ -2.39
POLR1AO95602 RPL26P26-201ENST00000480251 434 ntBASIC0.13□□□□□ -2.39
POLR1AO95602 SCARNA15.2-201ENST00000516409 127 ntBASIC0.13□□□□□ -2.39
POLR1AO95602 SNORA70.22-201ENST00000517160 124 ntBASIC0.13□□□□□ -2.39
POLR1AO95602 AC093913.1-201ENST00000614178 329 ntBASIC0.13□□□□□ -2.39
POLR1AO95602 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.13□□□□□ -2.39
POLR1AO95602 FARSBP1-201ENST00000435808 1778 ntBASIC0.12□□□□□ -2.39
POLR1AO95602 AC245060.5-201ENST00000610778 3293 ntBASIC0.12□□□□□ -2.39
POLR1AO95602 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
POLR1AO95602 RNY4P3-201ENST00000365254 95 ntBASIC0.12□□□□□ -2.39
POLR1AO95602 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.12□□□□□ -2.39
POLR1AO95602 AC112206.3-201ENST00000514578 389 ntBASIC0.12□□□□□ -2.39
POLR1AO95602 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.12□□□□□ -2.39
POLR1AO95602 AC023158.1-201ENST00000561632 1025 ntBASIC0.12□□□□□ -2.39
POLR1AO95602 AC006001.4-201ENST00000622243 395 ntBASIC0.12□□□□□ -2.39
POLR1AO95602 AC007490.1-201ENST00000624321 703 ntBASIC0.12□□□□□ -2.39
POLR1AO95602 MTND1P37-201ENST00000636562 264 ntBASIC0.12□□□□□ -2.39
POLR1AO95602 RNU6-43P-201ENST00000384302 107 ntBASIC0.11□□□□□ -2.39
POLR1AO95602 SNORD51-201ENST00000384320 80 ntBASIC0.11□□□□□ -2.39
POLR1AO95602 MIR200A-201ENST00000384875 90 ntBASIC0.11□□□□□ -2.39
POLR1AO95602 MIR1302-8-201ENST00000408342 128 ntBASIC0.11□□□□□ -2.39
POLR1AO95602 RNU2-43P-201ENST00000410306 190 ntBASIC0.11□□□□□ -2.39
POLR1AO95602 AC118282.2-201ENST00000508739 374 ntBASIC0.11□□□□□ -2.39
POLR1AO95602 PTP4A1P4-201ENST00000512479 322 ntBASIC0.11□□□□□ -2.39
POLR1AO95602 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.11□□□□□ -2.39
POLR1AO95602 RNU4-18P-201ENST00000516751 149 ntBASIC0.11□□□□□ -2.39
POLR1AO95602 RN7SKP88-201ENST00000516847 250 ntBASIC0.11□□□□□ -2.39
POLR1AO95602 AC087897.1-201ENST00000550134 156 ntBASIC0.11□□□□□ -2.39
POLR1AO95602 AL512310.8-201ENST00000550183 120 ntBASIC0.11□□□□□ -2.39
POLR1AO95602 7SK.8-201ENST00000612110 250 ntBASIC0.11□□□□□ -2.39
POLR1AO95602 7SK.11-201ENST00000615477 250 ntBASIC0.11□□□□□ -2.39
POLR1AO95602 7SK.13-201ENST00000622040 250 ntBASIC0.11□□□□□ -2.39
POLR1AO95602 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.11□□□□□ -2.39
POLR1AO95602 AC090625.1-201ENST00000357130 210 ntBASIC0.1□□□□□ -2.39
POLR1AO95602 MIR302D-201ENST00000362275 68 ntBASIC0.1□□□□□ -2.39
POLR1AO95602 RNA5SP361-201ENST00000362686 118 ntBASIC0.1□□□□□ -2.39
POLR1AO95602 RNU4-12P-201ENST00000365233 139 ntBASIC0.1□□□□□ -2.39
POLR1AO95602 MIR135A2-201ENST00000384854 100 ntBASIC0.1□□□□□ -2.39
POLR1AO95602 RNU2-48P-201ENST00000410694 191 ntBASIC0.1□□□□□ -2.39
POLR1AO95602 RNU2-7P-201ENST00000410794 178 ntBASIC0.1□□□□□ -2.39
POLR1AO95602 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.1□□□□□ -2.39
POLR1AO95602 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
POLR1AO95602 RPEP5-201ENST00000441137 268 ntBASIC0.1□□□□□ -2.39
POLR1AO95602 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.1□□□□□ -2.39
POLR1AO95602 AC022616.8-201ENST00000533569 253 ntBASIC0.1□□□□□ -2.39
POLR1AO95602 AL162730.1-201ENST00000605734 292 ntBASIC0.1□□□□□ -2.39
POLR1AO95602 AC009237.15-201ENST00000610252 501 ntBASIC0.1□□□□□ -2.39
POLR1AO95602 AC104465.1-201ENST00000611365 139 ntBASIC0.1□□□□□ -2.39
POLR1AO95602 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.1□□□□□ -2.39
POLR1AO95602 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
POLR1AO95602 Y_RNA.185-201ENST00000363894 100 ntBASIC0.1□□□□□ -2.39
POLR1AO95602 SNORD82-201ENST00000365530 70 ntBASIC0.1□□□□□ -2.39
POLR1AO95602 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms