Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 KATNBL1P6-201ENST00000453433 915 ntBASIC1.88□□□□□ -2.11
CLDN9O95484 TAF9P2-201ENST00000454958 515 ntBASIC1.88□□□□□ -2.11
CLDN9O95484 RNU7-125P-201ENST00000458760 62 ntBASIC1.88□□□□□ -2.11
CLDN9O95484 AC018868.1-201ENST00000491307 315 ntBASIC1.88□□□□□ -2.11
CLDN9O95484 AC091965.2-201ENST00000512324 613 ntBASIC1.88□□□□□ -2.11
CLDN9O95484 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.88□□□□□ -2.11
CLDN9O95484 RNA5SP137-201ENST00000516833 135 ntBASIC1.88□□□□□ -2.11
CLDN9O95484 AC034114.1-201ENST00000520293 285 ntBASIC1.88□□□□□ -2.11
CLDN9O95484 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.88□□□□□ -2.11
CLDN9O95484 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.88□□□□□ -2.11
CLDN9O95484 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.88□□□□□ -2.11
CLDN9O95484 MIR548AB-201ENST00000584917 84 ntBASIC1.88□□□□□ -2.11
CLDN9O95484 AC009977.1-201ENST00000586015 570 ntBASIC1.88□□□□□ -2.11
CLDN9O95484 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
CLDN9O95484 uc_338.15-201ENST00000615470 191 ntBASIC1.88□□□□□ -2.11
CLDN9O95484 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.88□□□□□ -2.11
CLDN9O95484 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CLDN9O95484 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CLDN9O95484 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
CLDN9O95484 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CLDN9O95484 HAUS6P2-201ENST00000433254 2404 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 OR4G2P-201ENST00000328113 903 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CLDN9O95484 RNU6-487P-201ENST00000365430 104 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 SNORA20.2-201ENST00000383922 131 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.87□□□□□ -2.11
CLDN9O95484 HMGN2P39-201ENST00000398005 273 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 RNU2-2P-201ENST00000410396 191 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 RNU2-8P-201ENST00000410727 190 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CLDN9O95484 RPL23AP36-201ENST00000413895 458 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.87□□□□□ -2.11
CLDN9O95484 C1DP2-201ENST00000418167 426 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 EIF1AXP1-201ENST00000419267 435 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN9O95484 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN9O95484 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.87□□□□□ -2.11
CLDN9O95484 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN9O95484 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.87□□□□□ -2.11
CLDN9O95484 AL360271.2-201ENST00000447710 161 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 AC245517.4-201ENST00000448601 281 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN9O95484 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.87□□□□□ -2.11
CLDN9O95484 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN9O95484 RPL30P6-201ENST00000475925 342 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.87□□□□□ -2.11
CLDN9O95484 RNA5SP445-201ENST00000515889 115 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN9O95484 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN9O95484 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN9O95484 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CLDN9O95484 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN9O95484 CR383656.8-201ENST00000549046 145 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 ZNF321P-202ENST00000550843 495 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 IMMP1LP2-201ENST00000552954 492 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN9O95484 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.87□□□□□ -2.11
CLDN9O95484 MIR4287-201ENST00000579398 78 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 AC005771.1-201ENST00000585581 349 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 AC008521.1-201ENST00000587471 187 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 AC078899.2-201ENST00000595282 212 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 AL353778.1-201ENST00000603149 408 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 ELOCP5-201ENST00000604924 333 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 AL670379.4-201ENST00000605279 254 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 AC098614.4-201ENST00000607601 462 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.87□□□□□ -2.11
CLDN9O95484 U2.15-201ENST00000611544 191 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 U2.16-201ENST00000613119 191 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 U2.12-201ENST00000613778 191 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 U2.20-201ENST00000613956 192 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 U2.9-201ENST00000615427 191 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 U2.11-201ENST00000616345 191 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 U2.2-201ENST00000616535 191 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 U2.3-201ENST00000617785 191 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 U2.19-201ENST00000618602 191 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 RNU2-1-201ENST00000618664 191 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 U2.6-201ENST00000619225 191 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 U2.5-201ENST00000619465 191 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 U2.10-201ENST00000620268 191 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 YWHAEP7-203ENST00000622054 312 ntBASIC1.87□□□□□ -2.11
CLDN9O95484 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.87□□□□□ -2.11
CLDN9O95484 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.87□□□□□ -2.11
CLDN9O95484 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
CLDN9O95484 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.86□□□□□ -2.11
CLDN9O95484 U3.13-201ENST00000364804 214 ntBASIC1.86□□□□□ -2.11
CLDN9O95484 RNU6-384P-201ENST00000364900 104 ntBASIC1.86□□□□□ -2.11
CLDN9O95484 RNU6-61P-201ENST00000365528 109 ntBASIC1.86□□□□□ -2.11
CLDN9O95484 SUMO2P12-201ENST00000405924 140 ntBASIC1.86□□□□□ -2.11
CLDN9O95484 Y_RNA.598-201ENST00000410480 95 ntBASIC1.86□□□□□ -2.11
CLDN9O95484 RNU2-40P-201ENST00000410833 196 ntBASIC1.86□□□□□ -2.11
CLDN9O95484 EEF1A1P40-201ENST00000412883 573 ntBASIC1.86□□□□□ -2.11
CLDN9O95484 AL356379.1-201ENST00000414105 126 ntBASIC1.86□□□□□ -2.11
CLDN9O95484 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.86□□□□□ -2.11
CLDN9O95484 AL365400.1-201ENST00000431854 640 ntBASIC1.86□□□□□ -2.11
CLDN9O95484 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.86□□□□□ -2.11
CLDN9O95484 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.86□□□□□ -2.11
CLDN9O95484 AC104850.1-201ENST00000435940 476 ntBASIC1.86□□□□□ -2.11
CLDN9O95484 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CLDN9O95484 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.86□□□□□ -2.11
CLDN9O95484 MTND1P30-201ENST00000441241 901 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 209 ms