Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 RNU6-927P-201ENST00000516199 100 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 OR5B19P-201ENST00000531766 928 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.55□□□□□ -2.32
ABCA1O95477 AC133485.1-201ENST00000567176 124 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 AC138907.6-201ENST00000568401 126 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 AC090615.1-201ENST00000577519 154 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 MIR3937-201ENST00000580135 106 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.55□□□□□ -2.32
ABCA1O95477 AC098614.4-201ENST00000607601 462 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 AC073544.1-201ENST00000600110 1595 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 RNU6-216P-201ENST00000363282 104 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 SNORD65C-201ENST00000390962 71 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 HMGB1P17-201ENST00000403495 628 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 RNA5SP193-201ENST00000410353 107 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 RNA5SP501-201ENST00000410990 112 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 SFR1P2-201ENST00000421841 730 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 AC000111.3-201ENST00000433478 193 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 AC002381.1-201ENST00000447049 280 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.54□□□□□ -2.32
ABCA1O95477 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.54□□□□□ -2.32
ABCA1O95477 AC114982.1-201ENST00000469402 321 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.54□□□□□ -2.32
ABCA1O95477 RNU6-703P-201ENST00000516946 107 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 RNU6-902P-201ENST00000517212 91 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.54□□□□□ -2.32
ABCA1O95477 APOOP3-201ENST00000536787 586 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 AC090502.2-201ENST00000549267 280 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.54□□□□□ -2.32
ABCA1O95477 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.54□□□□□ -2.32
ABCA1O95477 AC233702.2-202ENST00000562547 291 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.54□□□□□ -2.32
ABCA1O95477 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.54□□□□□ -2.32
ABCA1O95477 Z82243.1-201ENST00000609432 473 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 AL355472.4-201ENST00000610233 626 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 AC005332.6-201ENST00000613178 446 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.54□□□□□ -2.32
ABCA1O95477 AC012676.2-201ENST00000619258 186 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
ABCA1O95477 AC138393.1-203ENST00000327086 343 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 RNU6-160P-201ENST00000384591 107 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
ABCA1O95477 AC119751.3-201ENST00000399720 670 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 RNU4-27P-201ENST00000410889 139 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 UBE2V2P3-201ENST00000433562 437 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 TPTE2P1-204ENST00000435256 593 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 SNRPEP7-201ENST00000438350 220 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 AC069257.2-201ENST00000441819 155 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 RNU6-333P-201ENST00000459117 107 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 AC109927.2-201ENST00000506416 303 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 AC118282.2-201ENST00000508739 374 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.54□□□□□ -2.32
ABCA1O95477 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.54□□□□□ -2.32
ABCA1O95477 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.54□□□□□ -2.32
ABCA1O95477 TRAV32-201ENST00000553993 340 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 AC100814.1-201ENST00000606963 623 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 AL445264.1-201ENST00000621719 171 ntBASIC0.54□□□□□ -2.32
ABCA1O95477 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
ABCA1O95477 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.53□□□□□ -2.32
ABCA1O95477 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.53□□□□□ -2.32
ABCA1O95477 RNU6-222P-201ENST00000362438 107 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 RNU6-271P-201ENST00000363858 105 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 RNU1-39P-201ENST00000383897 165 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 SNORD116-23-201ENST00000384645 92 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 MIR608-201ENST00000384820 100 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 BTF3L4P2-201ENST00000392798 346 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 AL590084.2-201ENST00000401481 382 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 RPL37P10-201ENST00000412884 288 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 RPL21P24-201ENST00000413752 448 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 VN1R42P-201ENST00000424651 344 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 MTND4P6-201ENST00000438297 472 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.53□□□□□ -2.32
ABCA1O95477 AC020550.1-201ENST00000447385 163 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
ABCA1O95477 FCF1P6-201ENST00000456841 595 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 RPS27P22-201ENST00000478056 241 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 AC023194.1-201ENST00000493084 308 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 AC021146.2-201ENST00000504736 556 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.53□□□□□ -2.32
ABCA1O95477 RNU6-229P-201ENST00000516614 102 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 RN7SKP256-201ENST00000517201 314 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 AC006518.2-201ENST00000542513 940 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.53□□□□□ -2.32
ABCA1O95477 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.53□□□□□ -2.32
ABCA1O95477 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.53□□□□□ -2.32
ABCA1O95477 NIFKP6-201ENST00000598115 845 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 AC107075.1-201ENST00000613695 314 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 MIR2909-201ENST00000617113 69 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 MIR8065-201ENST00000620577 100 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 AC243829.3-201ENST00000622177 108 ntBASIC0.53□□□□□ -2.32
ABCA1O95477 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
ABCA1O95477 MIR424-201ENST00000362227 98 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 MIR508-201ENST00000384857 115 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 RNU6-796P-201ENST00000391086 107 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 RN7SKP61-201ENST00000410642 295 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 RNA5SP100-201ENST00000410903 110 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 RNA5SP59-201ENST00000410922 110 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 AL353621.1-201ENST00000418219 243 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 NCOR1P3-201ENST00000420479 303 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.53□□□□□ -2.33
ABCA1O95477 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.53□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms