Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.59□□□□□ -1.83
CDKL5O76039 SDAD1P2-201ENST00000441308 2028 ntBASIC3.59□□□□□ -1.83
CDKL5O76039 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDKL5O76039 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.59□□□□□ -1.84
CDKL5O76039 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDKL5O76039 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CDKL5O76039 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDKL5O76039 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CDKL5O76039 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.58□□□□□ -1.84
CDKL5O76039 RNU6-490P-201ENST00000362985 107 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 RNU6-26P-201ENST00000383985 107 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 Y_RNA.557-201ENST00000384680 107 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CDKL5O76039 HMGB3P2-201ENST00000411913 584 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.58□□□□□ -1.84
CDKL5O76039 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.58□□□□□ -1.84
CDKL5O76039 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.58□□□□□ -1.84
CDKL5O76039 RPS24P13-201ENST00000442520 397 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 FTH1P25-201ENST00000447665 469 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.58□□□□□ -1.84
CDKL5O76039 RPS26P21-201ENST00000475397 348 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 AC022493.1-201ENST00000492984 337 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.58□□□□□ -1.84
CDKL5O76039 MLLT10P2-201ENST00000506434 249 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.58□□□□□ -1.84
CDKL5O76039 RNU1-86P-201ENST00000516108 154 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 RNU1-107P-201ENST00000516617 154 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 AC069113.1-201ENST00000517763 267 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.58□□□□□ -1.84
CDKL5O76039 MIR5004-201ENST00000579078 107 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 UBL5P2-201ENST00000583788 219 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 MIR3149-201ENST00000584629 83 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 AC006006.1-201ENST00000603082 144 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 AC098826.3-201ENST00000603823 466 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.58□□□□□ -1.84
CDKL5O76039 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.58□□□□□ -1.84
CDKL5O76039 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CDKL5O76039 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
CDKL5O76039 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDKL5O76039 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDKL5O76039 SNORA63.1-201ENST00000362493 131 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 RNU6-173P-201ENST00000364215 104 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 RNU6-335P-201ENST00000364563 113 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.57□□□□□ -1.84
CDKL5O76039 RNU6-505P-201ENST00000384427 107 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 RNU6-1179P-201ENST00000384667 107 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 Y_RNA.645-201ENST00000391229 102 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 AL031121.1-201ENST00000406553 254 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 RN7SKP123-201ENST00000410732 291 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 AL353621.1-201ENST00000418219 243 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 UBE2D3P2-201ENST00000424409 445 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.57□□□□□ -1.84
CDKL5O76039 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDKL5O76039 HMGN2P16-201ENST00000456802 261 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 AC087588.1-201ENST00000462203 316 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.57□□□□□ -1.84
CDKL5O76039 AC010285.1-201ENST00000470580 392 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 RPS15AP34-201ENST00000487776 387 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 HMGB1P22-201ENST00000505315 124 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 AC008716.1-201ENST00000511084 513 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 RN7SKP282-201ENST00000516824 299 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 RNU6-1315P-201ENST00000517187 99 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDKL5O76039 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDKL5O76039 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
CDKL5O76039 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.57□□□□□ -1.84
CDKL5O76039 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.57□□□□□ -1.84
CDKL5O76039 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.57□□□□□ -1.84
CDKL5O76039 AC002545.1-201ENST00000592511 181 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.57□□□□□ -1.84
CDKL5O76039 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.57□□□□□ -1.84
CDKL5O76039 CDC27P3-201ENST00000635418 1910 ntBASIC3.57□□□□□ -1.84
CDKL5O76039 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CDKL5O76039 AC093010.3-201ENST00000570269 15214 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 RNU6-1167P-201ENST00000363227 94 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 Y_RNA.452-201ENST00000384202 108 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 RPL21P3-201ENST00000395517 478 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 MRPS18CP6-201ENST00000423587 223 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.56□□□□□ -1.84
CDKL5O76039 AC006946.1-201ENST00000429106 328 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.56□□□□□ -1.84
CDKL5O76039 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.56□□□□□ -1.84
CDKL5O76039 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.56□□□□□ -1.84
CDKL5O76039 AC146507.2-201ENST00000460608 476 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.56□□□□□ -1.84
CDKL5O76039 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.56□□□□□ -1.84
CDKL5O76039 RN7SL20P-201ENST00000488827 297 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 AC018437.1-201ENST00000492214 406 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.56□□□□□ -1.84
CDKL5O76039 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.56□□□□□ -1.84
CDKL5O76039 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.56□□□□□ -1.84
CDKL5O76039 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.56□□□□□ -1.84
CDKL5O76039 AC109446.1-201ENST00000566172 220 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 MIR3690-201ENST00000580266 75 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 MIR3944-201ENST00000581277 108 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 OR1M4P-201ENST00000589199 287 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 SNRPGP15-201ENST00000600149 222 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.56□□□□□ -1.84
CDKL5O76039 AL161798.1-201ENST00000604630 131 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms