Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 PIGFP3-201ENST00000441918 722 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.13□□□□□ -1.91
CNOT3O75175 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.13□□□□□ -1.91
CNOT3O75175 AL160314.1-201ENST00000490836 438 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 AC022493.1-201ENST00000492984 337 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.13□□□□□ -1.91
CNOT3O75175 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.13□□□□□ -1.91
CNOT3O75175 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.13□□□□□ -1.91
CNOT3O75175 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.13□□□□□ -1.91
CNOT3O75175 SCARNA16.2-201ENST00000516520 172 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.13□□□□□ -1.91
CNOT3O75175 MIR1273C-201ENST00000578669 77 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 LRRC37A5P-203ENST00000580181 585 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 AC078899.3-201ENST00000599065 212 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.13□□□□□ -1.91
CNOT3O75175 AC006157.1-201ENST00000611750 366 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.13□□□□□ -1.91
CNOT3O75175 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CNOT3O75175 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CNOT3O75175 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CNOT3O75175 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CNOT3O75175 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CNOT3O75175 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CNOT3O75175 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CNOT3O75175 AC002546.1-201ENST00000588041 2504 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 MIR128-1-201ENST00000384921 82 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 SNORA75.6-201ENST00000391318 127 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 AL356057.3-201ENST00000402607 340 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 RNU6-607P-201ENST00000411283 108 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 CYCSP33-201ENST00000414485 327 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 AL353621.1-201ENST00000418219 243 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 MTCYBP10-201ENST00000424905 650 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 USMG5P1-201ENST00000425964 177 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.12□□□□□ -1.91
CNOT3O75175 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.12□□□□□ -1.91
CNOT3O75175 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.12□□□□□ -1.91
CNOT3O75175 PCMTD1P1-201ENST00000455560 355 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 RN7SL75P-201ENST00000461926 281 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 RPS20P22-201ENST00000473700 357 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.12□□□□□ -1.91
CNOT3O75175 RNU1-86P-201ENST00000516108 154 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 SNORA31.8-201ENST00000516327 108 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 MIR892C-201ENST00000516410 77 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 RNU1-107P-201ENST00000516617 154 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 AC009902.1-201ENST00000519351 183 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.12□□□□□ -1.91
CNOT3O75175 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
CNOT3O75175 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.12□□□□□ -1.91
CNOT3O75175 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.12□□□□□ -1.91
CNOT3O75175 AC007485.1-201ENST00000616755 206 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.12□□□□□ -1.91
CNOT3O75175 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CNOT3O75175 MTND5P16-201ENST00000460269 1703 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 AC110774.1-201ENST00000623567 2018 ntBASIC3.12□□□□□ -1.91
CNOT3O75175 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CNOT3O75175 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CNOT3O75175 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.11□□□□□ -1.91
CNOT3O75175 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.11□□□□□ -1.91
CNOT3O75175 MTND5P30-201ENST00000452896 1731 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 Y_RNA.5-201ENST00000362334 102 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 Y_RNA.144-201ENST00000363521 113 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 Y_RNA.364-201ENST00000365532 101 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 U3.19-201ENST00000390893 196 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 SNORA26.7-201ENST00000391288 122 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 RNU2-3P-201ENST00000410144 191 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 Z92545.1-201ENST00000411782 234 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.11□□□□□ -1.91
CNOT3O75175 RPL32P35-201ENST00000415214 394 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 MCFD2P1-201ENST00000417812 300 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 TOMM20P4-201ENST00000427861 435 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 AL590383.1-201ENST00000428602 75 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 AL645568.3-201ENST00000433683 316 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.11□□□□□ -1.91
CNOT3O75175 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.11□□□□□ -1.91
CNOT3O75175 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.11□□□□□ -1.91
CNOT3O75175 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.11□□□□□ -1.91
CNOT3O75175 KC877373.1-201ENST00000479066 408 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.11□□□□□ -1.91
CNOT3O75175 AC022493.2-201ENST00000506122 481 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 RNU6-120P-201ENST00000516077 103 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 RNA5SP384-201ENST00000516615 116 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 RN7SKP282-201ENST00000516824 299 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 RNU6-264P-201ENST00000517134 104 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 Y_RNA.720-201ENST00000517166 92 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 RNA5SP291-201ENST00000517222 105 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 SNORA31.26-201ENST00000517250 137 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.11□□□□□ -1.91
CNOT3O75175 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.11□□□□□ -1.91
CNOT3O75175 ATP5F1P5-201ENST00000526403 760 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.11□□□□□ -1.91
CNOT3O75175 AC109446.1-201ENST00000566172 220 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 AC010653.1-201ENST00000571108 881 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 MIR5004-201ENST00000579078 107 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 AC011471.1-201ENST00000585766 187 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 AC011494.1-201ENST00000596454 237 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 AC007938.3-201ENST00000604965 623 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 AC106900.2-201ENST00000604994 317 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 AC005014.2-201ENST00000607795 599 ntBASIC3.11□□□□□ -1.91
CNOT3O75175 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CNOT3O75175 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms