Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCD1O75127 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCD1O75127 RNU7-175P-201ENST00000515915 61 ntBASIC4.88□□□□□ -1.63
PTCD1O75127 SNORA31.18-201ENST00000517043 134 ntBASIC4.88□□□□□ -1.63
PTCD1O75127 MTND6P33-201ENST00000571794 183 ntBASIC4.88□□□□□ -1.63
PTCD1O75127 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.88□□□□□ -1.63
PTCD1O75127 BX284668.6-201ENST00000606899 438 ntBASIC4.88□□□□□ -1.63
PTCD1O75127 SCARNA4-202ENST00000625402 129 ntBASIC4.88□□□□□ -1.63
PTCD1O75127 AC243829.7-201ENST00000633081 225 ntBASIC4.88□□□□□ -1.63
PTCD1O75127 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTCD1O75127 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCD1O75127 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PTCD1O75127 MAPK10-372ENST00000641954 3413 ntBASIC4.88□□□□□ -1.63
PTCD1O75127 LINC01109-201ENST00000603837 3081 ntBASIC4.88□□□□□ -1.63
PTCD1O75127 ZNF962P-201ENST00000443465 3140 ntBASIC4.88□□□□□ -1.63
PTCD1O75127 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTCD1O75127 AP001273.1-201ENST00000624493 3152 ntBASIC4.87□□□□□ -1.63
PTCD1O75127 RNU6-600P-201ENST00000362524 99 ntBASIC4.87□□□□□ -1.63
PTCD1O75127 Y_RNA.76-201ENST00000362931 109 ntBASIC4.87□□□□□ -1.63
PTCD1O75127 RNU6-527P-201ENST00000363425 104 ntBASIC4.87□□□□□ -1.63
PTCD1O75127 MIR490-201ENST00000384865 128 ntBASIC4.87□□□□□ -1.63
PTCD1O75127 MIR493-201ENST00000385254 89 ntBASIC4.87□□□□□ -1.63
PTCD1O75127 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.87□□□□□ -1.63
PTCD1O75127 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCD1O75127 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCD1O75127 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCD1O75127 RNU7-200P-201ENST00000516105 62 ntBASIC4.87□□□□□ -1.63
PTCD1O75127 RNU6-1338P-201ENST00000516328 91 ntBASIC4.87□□□□□ -1.63
PTCD1O75127 RNA5SP164-201ENST00000516533 110 ntBASIC4.87□□□□□ -1.63
PTCD1O75127 RN7SKP272-201ENST00000516988 232 ntBASIC4.87□□□□□ -1.63
PTCD1O75127 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.87□□□□□ -1.63
PTCD1O75127 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCD1O75127 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCD1O75127 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCD1O75127 AC104581.2-201ENST00000572227 430 ntBASIC4.87□□□□□ -1.63
PTCD1O75127 AC136932.1-201ENST00000574771 208 ntBASIC4.87□□□□□ -1.63
PTCD1O75127 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCD1O75127 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PTCD1O75127 LINC01355-201ENST00000566551 5444 ntBASIC4.87□□□□□ -1.63
PTCD1O75127 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCD1O75127 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PTCD1O75127 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PTCD1O75127 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.87□□□□□ -1.63
PTCD1O75127 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCD1O75127 SCN1A-220ENST00000641603 12506 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 Y_RNA.122-201ENST00000363331 96 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 Y_RNA.199-201ENST00000364014 102 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 RNU6-47P-201ENST00000383866 107 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 RNY1P5-201ENST00000383890 115 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 Y_RNA.458-201ENST00000384240 102 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PTCD1O75127 RPS29P13-201ENST00000402041 169 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 ATP5A1P2-201ENST00000412323 255 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.86□□□□□ -1.63
PTCD1O75127 AC124916.1-201ENST00000444020 547 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 RPL23AP49-201ENST00000492925 468 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 AC010469.2-201ENST00000496412 480 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 RAC1P2-201ENST00000511164 579 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 Y_RNA.713-201ENST00000517013 96 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.86□□□□□ -1.63
PTCD1O75127 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 RPL23AP78-201ENST00000599928 470 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 SNORA62.6-201ENST00000606322 83 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.86□□□□□ -1.63
PTCD1O75127 AC097372.5-201ENST00000623665 376 ntBASIC4.86□□□□□ -1.63
PTCD1O75127 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTCD1O75127 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTCD1O75127 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCD1O75127 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCD1O75127 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
PTCD1O75127 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
PTCD1O75127 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
PTCD1O75127 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PTCD1O75127 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.85□□□□□ -1.63
PTCD1O75127 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.85□□□□□ -1.63
PTCD1O75127 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTCD1O75127 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.85□□□□□ -1.63
PTCD1O75127 RNU6-658P-201ENST00000384606 106 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 RPL21P75-201ENST00000396599 483 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 RPL21P28-201ENST00000401418 483 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 AL590556.1-201ENST00000423231 483 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 SNORA71B-202ENST00000439232 272 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 AC069285.2-201ENST00000440210 275 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.85□□□□□ -1.63
PTCD1O75127 RPL21P39-201ENST00000463605 483 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 AC087190.1-201ENST00000484462 480 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 AC107032.1-201ENST00000485945 480 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 AC132942.1-201ENST00000486753 483 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 AC093591.1-201ENST00000491435 481 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 RPL21P16-201ENST00000495531 483 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 AC078918.1-201ENST00000498515 228 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 SNORA31.6-201ENST00000516241 130 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 AF186190.1-201ENST00000517470 480 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 AC107016.1-201ENST00000550463 337 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 AL442163.3-201ENST00000554110 156 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 GNRHR2P1-201ENST00000555315 631 ntBASIC4.85□□□□□ -1.63
PTCD1O75127 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.85□□□□□ -1.63
PTCD1O75127 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTCD1O75127 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.85□□□□□ -1.63
PTCD1O75127 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms