Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 U1.36-201ENST00000620684 176 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 AC092656.1-203ENST00000624134 423 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 AC106858.1-201ENST00000637497 429 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 AC013437.2-201ENST00000639587 677 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SHOX2O60902 RNY4P24-201ENST00000362735 96 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 RNU6-487P-201ENST00000365430 104 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
SHOX2O60902 RNU6-611P-201ENST00000384276 104 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 Y_RNA.534-201ENST00000384599 112 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 RNU6-1000P-201ENST00000391066 106 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 RNU2-62P-201ENST00000410868 191 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.47□□□□□ -2.17
SHOX2O60902 AC004965.1-201ENST00000413033 213 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 AL022400.1-201ENST00000423946 935 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 AC008267.5-201ENST00000424928 265 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.47□□□□□ -2.17
SHOX2O60902 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.47□□□□□ -2.17
SHOX2O60902 AC015922.2-201ENST00000435593 184 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 LARP1BP3-201ENST00000437229 869 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 AP000949.1-201ENST00000438328 629 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 SNORD13-201ENST00000459299 104 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 MED28P2-201ENST00000475771 317 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 RPS3AP22-201ENST00000488297 769 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.47□□□□□ -2.17
SHOX2O60902 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
SHOX2O60902 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 RNA5SP102-201ENST00000516865 106 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 RNU6-250P-201ENST00000516958 103 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.47□□□□□ -2.17
SHOX2O60902 AC087441.2-201ENST00000529141 262 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.47□□□□□ -2.17
SHOX2O60902 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.47□□□□□ -2.17
SHOX2O60902 AP000763.2-201ENST00000540641 163 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 AL157871.3-201ENST00000557231 293 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SHOX2O60902 AL391001.1-201ENST00000602747 715 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 AC174048.1-201ENST00000603389 144 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 AC136443.5-201ENST00000603741 370 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 AC097468.3-201ENST00000607956 456 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.47□□□□□ -2.17
SHOX2O60902 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.47□□□□□ -2.17
SHOX2O60902 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.47□□□□□ -2.17
SHOX2O60902 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.47□□□□□ -2.17
SHOX2O60902 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.47□□□□□ -2.17
SHOX2O60902 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SHOX2O60902 AC006026.1-201ENST00000444025 1803 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 RNU6-529P-201ENST00000363383 104 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 RNU6-1032P-201ENST00000384100 107 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 RNU6-769P-201ENST00000384407 104 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 AL627390.1-201ENST00000396055 340 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 AC119751.3-201ENST00000399720 670 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 MIR934-201ENST00000401241 83 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 RNU6-1025P-201ENST00000410629 104 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 ELOCP17-201ENST00000414751 326 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 ELOCP9-201ENST00000418624 239 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 RPS3AP37-201ENST00000419176 745 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.46□□□□□ -2.18
SHOX2O60902 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.46□□□□□ -2.18
SHOX2O60902 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.46□□□□□ -2.18
SHOX2O60902 AL591212.2-201ENST00000433923 257 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 AC118469.1-201ENST00000442943 488 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
SHOX2O60902 Z73417.1-201ENST00000447373 778 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 FCF1P6-201ENST00000456841 595 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.46□□□□□ -2.18
SHOX2O60902 RNU2-53P-201ENST00000516257 147 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.46□□□□□ -2.18
SHOX2O60902 CYCSP27-201ENST00000527643 293 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.46□□□□□ -2.18
SHOX2O60902 MTCYBP23-201ENST00000558717 1102 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 AC093249.1-201ENST00000567049 203 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 AC136618.2-201ENST00000575091 400 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.46□□□□□ -2.18
SHOX2O60902 MIR3198-2-201ENST00000577868 80 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 MIR1273C-201ENST00000578669 77 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 VN1R82P-201ENST00000601481 356 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 AL592221.1-201ENST00000605266 382 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.46□□□□□ -2.18
SHOX2O60902 AC103810.8-201ENST00000607347 118 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 AC093788.1-201ENST00000609356 927 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.46□□□□□ -2.18
SHOX2O60902 AL355472.4-201ENST00000610233 626 ntBASIC1.46□□□□□ -2.18
SHOX2O60902 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.46□□□□□ -2.18
SHOX2O60902 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.46□□□□□ -2.18
SHOX2O60902 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SHOX2O60902 RNU6-858P-201ENST00000362436 107 ntBASIC1.45□□□□□ -2.18
SHOX2O60902 Y_RNA.33-201ENST00000362591 102 ntBASIC1.45□□□□□ -2.18
SHOX2O60902 RNU5E-10P-201ENST00000363506 118 ntBASIC1.45□□□□□ -2.18
SHOX2O60902 SNORD114-22-201ENST00000365423 72 ntBASIC1.45□□□□□ -2.18
SHOX2O60902 RNU6-395P-201ENST00000365662 106 ntBASIC1.45□□□□□ -2.18
SHOX2O60902 RNU6-723P-201ENST00000383973 107 ntBASIC1.45□□□□□ -2.18
SHOX2O60902 MIR186-201ENST00000384988 86 ntBASIC1.45□□□□□ -2.18
SHOX2O60902 MIR758-201ENST00000390227 88 ntBASIC1.45□□□□□ -2.18
SHOX2O60902 MIR1283-2-201ENST00000408621 87 ntBASIC1.45□□□□□ -2.18
SHOX2O60902 OR9R1P-201ENST00000412200 877 ntBASIC1.45□□□□□ -2.18
SHOX2O60902 AC009518.2-201ENST00000418056 731 ntBASIC1.45□□□□□ -2.18
SHOX2O60902 UBE2V1P4-201ENST00000425374 344 ntBASIC1.45□□□□□ -2.18
SHOX2O60902 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.45□□□□□ -2.18
SHOX2O60902 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms