Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.51□□□□□ -1.85
CTNND1O60716 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.51□□□□□ -1.85
CTNND1O60716 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTNND1O60716 MTND5P27-201ENST00000428871 1720 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTNND1O60716 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTNND1O60716 CD24P4-201ENST00000382840 243 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 RNU6-750P-201ENST00000390946 107 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 SAR1AP2-201ENST00000392696 594 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 AC022028.1-201ENST00000412054 408 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 PDCL2P1-201ENST00000419302 352 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 AL161651.1-201ENST00000440882 223 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 RPL23AP45-201ENST00000476406 468 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.51□□□□□ -1.85
CTNND1O60716 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.51□□□□□ -1.85
CTNND1O60716 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.51□□□□□ -1.85
CTNND1O60716 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.51□□□□□ -1.85
CTNND1O60716 SCGB1D5P-201ENST00000515134 247 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 SNORD19.2-201ENST00000516978 73 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 AC109479.2-201ENST00000517842 174 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 AC107016.2-201ENST00000547968 190 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 AC024153.1-201ENST00000603103 365 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 AL591516.1-201ENST00000611326 274 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 AL138726.1-201ENST00000614873 333 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 AC010378.1-201ENST00000619270 362 ntBASIC3.51□□□□□ -1.85
CTNND1O60716 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.51□□□□□ -1.85
CTNND1O60716 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTNND1O60716 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTNND1O60716 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CTNND1O60716 AC096644.4-201ENST00000563417 2912 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 RNU6-942P-201ENST00000363002 107 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 Y_RNA.212-201ENST00000364177 102 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 SNORD81.2-201ENST00000365153 76 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 RNU5E-7P-201ENST00000365290 117 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CTNND1O60716 SNORA48.8-201ENST00000391324 134 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.5□□□□□ -1.85
CTNND1O60716 AC096649.2-201ENST00000416186 393 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.5□□□□□ -1.85
CTNND1O60716 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CTNND1O60716 AC093151.1-201ENST00000427711 313 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 RPS12P18-201ENST00000442381 270 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 RPL32P28-201ENST00000443577 397 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.5□□□□□ -1.85
CTNND1O60716 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CTNND1O60716 AC006483.1-201ENST00000487308 313 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.5□□□□□ -1.85
CTNND1O60716 SCARNA20.6-201ENST00000517251 106 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 AC026371.1-201ENST00000551867 419 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 SCOCP1-201ENST00000554676 349 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 AC005668.1-201ENST00000571142 476 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.5□□□□□ -1.85
CTNND1O60716 AC023043.2-201ENST00000589678 1026 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.5□□□□□ -1.85
CTNND1O60716 AC020895.1-201ENST00000595362 272 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 AC005261.5-201ENST00000596280 355 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 AC011890.2-201ENST00000613393 294 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 AC025253.1-201ENST00000613623 543 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.5□□□□□ -1.85
CTNND1O60716 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CTNND1O60716 AC004944.1-201ENST00000517807 3059 ntBASIC3.5□□□□□ -1.85
CTNND1O60716 MIR449A-201ENST00000362113 91 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 RNA5SP139-201ENST00000364340 117 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 RNU5E-4P-201ENST00000364931 120 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 SNORD116-11-201ENST00000383882 92 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 MIR767-201ENST00000390228 109 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 RNU6-1009P-201ENST00000390996 107 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.49□□□□□ -1.85
CTNND1O60716 AL365400.1-201ENST00000431854 640 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.49□□□□□ -1.85
CTNND1O60716 RN7SL429P-201ENST00000479090 223 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 RN7SL489P-201ENST00000486185 223 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 RN7SL327P-201ENST00000488659 223 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 RPS27P26-201ENST00000494583 239 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.49□□□□□ -1.85
CTNND1O60716 RNU6-507P-201ENST00000516045 100 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 SNORA43.2-201ENST00000516652 128 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 RNU6-1088P-201ENST00000516850 104 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.49□□□□□ -1.85
CTNND1O60716 COPS8P3-201ENST00000526024 482 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 AP005597.4-201ENST00000526762 229 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CTNND1O60716 AC007151.1-201ENST00000572774 483 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.49□□□□□ -1.85
CTNND1O60716 AC107294.3-201ENST00000609211 526 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 AC063943.3-201ENST00000615562 356 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 RN7SL853P-201ENST00000617250 223 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 U4.7-201ENST00000638126 106 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 AC010889.1-201ENST00000566193 2666 ntBASIC3.49□□□□□ -1.85
CTNND1O60716 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CTNND1O60716 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CTNND1O60716 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.48□□□□□ -1.85
CTNND1O60716 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.48□□□□□ -1.85
CTNND1O60716 Y_RNA.70-201ENST00000362886 110 ntBASIC3.48□□□□□ -1.85
CTNND1O60716 Y_RNA.142-201ENST00000363491 102 ntBASIC3.48□□□□□ -1.85
CTNND1O60716 RNU6-1329P-201ENST00000365664 107 ntBASIC3.48□□□□□ -1.85
CTNND1O60716 RNU6-1027P-201ENST00000383998 107 ntBASIC3.48□□□□□ -1.85
CTNND1O60716 FTH1P15-201ENST00000406984 280 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms