Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MIR4422-201ENST00000581938 83 ntBASIC1.31□□□□□ -2.2
SGCEO43556 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.31□□□□□ -2.2
SGCEO43556 AL391001.1-201ENST00000602747 715 ntBASIC1.31□□□□□ -2.2
SGCEO43556 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.31□□□□□ -2.2
SGCEO43556 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.31□□□□□ -2.2
SGCEO43556 AC024940.5-201ENST00000622889 474 ntBASIC1.31□□□□□ -2.2
SGCEO43556 AC005858.4-201ENST00000623191 700 ntBASIC1.31□□□□□ -2.2
SGCEO43556 AC106858.1-201ENST00000637497 429 ntBASIC1.31□□□□□ -2.2
SGCEO43556 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SGCEO43556 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SGCEO43556 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.3□□□□□ -2.2
SGCEO43556 RNU6-212P-201ENST00000362642 104 ntBASIC1.3□□□□□ -2.2
SGCEO43556 RNU6-946P-201ENST00000383878 107 ntBASIC1.3□□□□□ -2.2
SGCEO43556 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.3□□□□□ -2.2
SGCEO43556 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SGCEO43556 SNORA67.5-201ENST00000391036 107 ntBASIC1.3□□□□□ -2.2
SGCEO43556 SNORA11.2-201ENST00000408318 127 ntBASIC1.3□□□□□ -2.2
SGCEO43556 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.3□□□□□ -2.2
SGCEO43556 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.3□□□□□ -2.2
SGCEO43556 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.3□□□□□ -2.2
SGCEO43556 CBX3P6-201ENST00000430257 527 ntBASIC1.3□□□□□ -2.2
SGCEO43556 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.3□□□□□ -2.2
SGCEO43556 AL035666.1-201ENST00000446195 348 ntBASIC1.3□□□□□ -2.2
SGCEO43556 AP001025.1-201ENST00000486139 332 ntBASIC1.3□□□□□ -2.2
SGCEO43556 RNU2-10P-201ENST00000516375 211 ntBASIC1.3□□□□□ -2.2
SGCEO43556 RNU6-467P-201ENST00000517027 110 ntBASIC1.3□□□□□ -2.2
SGCEO43556 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.3□□□□□ -2.2
SGCEO43556 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.3□□□□□ -2.2
SGCEO43556 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.3□□□□□ -2.2
SGCEO43556 AC023050.2-201ENST00000544968 387 ntBASIC1.3□□□□□ -2.2
SGCEO43556 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.3□□□□□ -2.2
SGCEO43556 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SGCEO43556 AL022154.1-201ENST00000604698 785 ntBASIC1.3□□□□□ -2.2
SGCEO43556 uc_338.12-201ENST00000616344 181 ntBASIC1.3□□□□□ -2.2
SGCEO43556 RNU6-511P-201ENST00000363496 107 ntBASIC1.29□□□□□ -2.2
SGCEO43556 RNU6-743P-201ENST00000364151 106 ntBASIC1.29□□□□□ -2.2
SGCEO43556 SNORD116-20-201ENST00000384529 92 ntBASIC1.29□□□□□ -2.2
SGCEO43556 MIR320A-201ENST00000385302 82 ntBASIC1.29□□□□□ -2.2
SGCEO43556 RNU6-1000P-201ENST00000391066 106 ntBASIC1.29□□□□□ -2.2
SGCEO43556 RNU1-78P-201ENST00000391248 165 ntBASIC1.29□□□□□ -2.2
SGCEO43556 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.29□□□□□ -2.2
SGCEO43556 AC007098.1-201ENST00000420122 367 ntBASIC1.29□□□□□ -2.2
SGCEO43556 TOMM20P4-201ENST00000427861 435 ntBASIC1.29□□□□□ -2.2
SGCEO43556 AL354695.1-201ENST00000427935 228 ntBASIC1.29□□□□□ -2.2
SGCEO43556 AL591806.2-201ENST00000433122 173 ntBASIC1.29□□□□□ -2.2
SGCEO43556 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.29□□□□□ -2.2
SGCEO43556 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.29□□□□□ -2.2
SGCEO43556 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.29□□□□□ -2.2
SGCEO43556 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.29□□□□□ -2.2
SGCEO43556 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.29□□□□□ -2.2
SGCEO43556 RPS29P23-201ENST00000458635 123 ntBASIC1.29□□□□□ -2.2
SGCEO43556 snoU109.2-201ENST00000459316 135 ntBASIC1.29□□□□□ -2.2
SGCEO43556 AC119751.4-201ENST00000507498 357 ntBASIC1.29□□□□□ -2.2
SGCEO43556 AC093259.1-201ENST00000509755 300 ntBASIC1.29□□□□□ -2.2
SGCEO43556 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.29□□□□□ -2.2
SGCEO43556 SNORA31.24-201ENST00000517232 57 ntBASIC1.29□□□□□ -2.2
SGCEO43556 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.29□□□□□ -2.2
SGCEO43556 TRAV32-201ENST00000553993 340 ntBASIC1.29□□□□□ -2.2
SGCEO43556 AC137800.2-201ENST00000574375 120 ntBASIC1.29□□□□□ -2.2
SGCEO43556 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.29□□□□□ -2.2
SGCEO43556 AL353778.1-201ENST00000603149 408 ntBASIC1.29□□□□□ -2.2
SGCEO43556 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.29□□□□□ -2.2
SGCEO43556 AL355816.2-201ENST00000610049 647 ntBASIC1.29□□□□□ -2.2
SGCEO43556 U6.42-201ENST00000618440 107 ntBASIC1.29□□□□□ -2.2
SGCEO43556 SCARNA4-202ENST00000625402 129 ntBASIC1.29□□□□□ -2.2
SGCEO43556 AC008993.2-201ENST00000631744 806 ntBASIC1.29□□□□□ -2.2
SGCEO43556 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
SGCEO43556 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.29□□□□□ -2.2
SGCEO43556 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
SGCEO43556 RNU6-23P-201ENST00000363283 107 ntBASIC1.28□□□□□ -2.2
SGCEO43556 RNU6-60P-201ENST00000364792 103 ntBASIC1.28□□□□□ -2.2
SGCEO43556 RNU6-160P-201ENST00000384591 107 ntBASIC1.28□□□□□ -2.2
SGCEO43556 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.28□□□□□ -2.2
SGCEO43556 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.28□□□□□ -2.2
SGCEO43556 AL590365.1-201ENST00000450788 243 ntBASIC1.28□□□□□ -2.2
SGCEO43556 RPL23AP35-201ENST00000451906 501 ntBASIC1.28□□□□□ -2.2
SGCEO43556 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.28□□□□□ -2.2
SGCEO43556 snoU13.9-201ENST00000458927 103 ntBASIC1.28□□□□□ -2.2
SGCEO43556 RPL30P6-201ENST00000475925 342 ntBASIC1.28□□□□□ -2.2
SGCEO43556 AC098862.1-201ENST00000504991 413 ntBASIC1.28□□□□□ -2.2
SGCEO43556 AC025465.3-201ENST00000510570 311 ntBASIC1.28□□□□□ -2.2
SGCEO43556 Y_RNA.689-201ENST00000516589 107 ntBASIC1.28□□□□□ -2.2
SGCEO43556 AP005597.4-201ENST00000526762 229 ntBASIC1.28□□□□□ -2.2
SGCEO43556 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.28□□□□□ -2.2
SGCEO43556 AC015720.1-201ENST00000565251 277 ntBASIC1.28□□□□□ -2.2
SGCEO43556 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.28□□□□□ -2.2
SGCEO43556 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.28□□□□□ -2.2
SGCEO43556 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.28□□□□□ -2.2
SGCEO43556 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.28□□□□□ -2.2
SGCEO43556 AL138889.2-201ENST00000603883 242 ntBASIC1.28□□□□□ -2.2
SGCEO43556 PRR13P7-201ENST00000605538 430 ntBASIC1.28□□□□□ -2.2
SGCEO43556 AC144521.1-201ENST00000607148 956 ntBASIC1.28□□□□□ -2.2
SGCEO43556 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.28□□□□□ -2.21
SGCEO43556 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
SGCEO43556 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.27□□□□□ -2.21
SGCEO43556 OR4G2P-201ENST00000328113 903 ntBASIC1.27□□□□□ -2.21
SGCEO43556 Y_RNA.40-201ENST00000362645 93 ntBASIC1.27□□□□□ -2.21
SGCEO43556 RNU1-42P-201ENST00000364033 160 ntBASIC1.27□□□□□ -2.21
SGCEO43556 SNORA75B-201ENST00000384053 137 ntBASIC1.27□□□□□ -2.21
SGCEO43556 AC092809.3-201ENST00000415453 231 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms