Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.81□□□□□ -2.28
HMGB3O15347 UBL5P1-201ENST00000507979 193 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 SNORA3.4-201ENST00000515969 96 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 MTND1P36-201ENST00000522384 936 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.81□□□□□ -2.28
HMGB3O15347 CYP3A52P-201ENST00000563326 91 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 AP003465.2-201ENST00000602571 373 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 MIR6857-201ENST00000613267 93 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 AC018926.1-201ENST00000616335 435 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 AL136313.1-201ENST00000624804 202 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 AC095038.3-201ENST00000634439 195 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 AL512643.1-201ENST00000635735 524 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
HMGB3O15347 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
HMGB3O15347 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
HMGB3O15347 Y_RNA.255-201ENST00000364581 97 ntBASIC0.8□□□□□ -2.28
HMGB3O15347 SNORA4.3-201ENST00000365564 137 ntBASIC0.8□□□□□ -2.28
HMGB3O15347 SNORA29-201ENST00000384183 140 ntBASIC0.8□□□□□ -2.28
HMGB3O15347 AL161935.2-201ENST00000414627 60 ntBASIC0.8□□□□□ -2.28
HMGB3O15347 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HMGB3O15347 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.8□□□□□ -2.28
HMGB3O15347 FTH1P12-201ENST00000432137 551 ntBASIC0.8□□□□□ -2.28
HMGB3O15347 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.8□□□□□ -2.28
HMGB3O15347 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.8□□□□□ -2.28
HMGB3O15347 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.8□□□□□ -2.28
HMGB3O15347 AC012308.1-201ENST00000451232 178 ntBASIC0.8□□□□□ -2.28
HMGB3O15347 RNU1-131P-201ENST00000458943 161 ntBASIC0.8□□□□□ -2.28
HMGB3O15347 RPL9P9-202ENST00000466501 579 ntBASIC0.8□□□□□ -2.28
HMGB3O15347 HMGB1P30-201ENST00000492455 606 ntBASIC0.8□□□□□ -2.28
HMGB3O15347 AC087897.1-201ENST00000550134 156 ntBASIC0.8□□□□□ -2.28
HMGB3O15347 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.8□□□□□ -2.28
HMGB3O15347 MTCYBP33-201ENST00000575007 1130 ntBASIC0.8□□□□□ -2.28
HMGB3O15347 AC078795.2-201ENST00000602835 1252 ntBASIC0.8□□□□□ -2.28
HMGB3O15347 AC007363.1-201ENST00000604736 620 ntBASIC0.8□□□□□ -2.28
HMGB3O15347 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.8□□□□□ -2.28
HMGB3O15347 AL512598.1-201ENST00000610158 273 ntBASIC0.8□□□□□ -2.28
HMGB3O15347 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HMGB3O15347 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
HMGB3O15347 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
HMGB3O15347 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.79□□□□□ -2.28
HMGB3O15347 MIR634-201ENST00000385208 97 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
HMGB3O15347 RNA5SP390-201ENST00000410191 113 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 Y_RNA.597-201ENST00000410463 100 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 RNU6-1025P-201ENST00000410629 104 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.79□□□□□ -2.28
HMGB3O15347 BTF3P4-201ENST00000418852 495 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 AC083875.1-201ENST00000419509 405 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.79□□□□□ -2.28
HMGB3O15347 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.79□□□□□ -2.28
HMGB3O15347 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.79□□□□□ -2.28
HMGB3O15347 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.79□□□□□ -2.28
HMGB3O15347 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.79□□□□□ -2.28
HMGB3O15347 KATNBL1P3-201ENST00000443475 909 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
HMGB3O15347 RNU6-953P-201ENST00000459154 107 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 RN7SKP210-201ENST00000459176 261 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 RPL30P12-201ENST00000474666 353 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
HMGB3O15347 RNU6-1315P-201ENST00000517187 99 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 AC019176.1-201ENST00000518519 225 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 AL512347.1-201ENST00000566420 503 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 AC092325.1-201ENST00000566449 554 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 AC015688.6-201ENST00000577737 104 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 MIR3937-201ENST00000580135 106 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 AP001542.1-201ENST00000591314 200 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 AC025811.1-201ENST00000604312 472 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 AC004492.1-201ENST00000607036 742 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
HMGB3O15347 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
HMGB3O15347 AC100821.1-201ENST00000523153 2479 ntBASIC0.79□□□□□ -2.28
HMGB3O15347 LINC02555-201ENST00000563933 1951 ntBASIC0.78□□□□□ -2.28
HMGB3O15347 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
HMGB3O15347 RNU6-457P-201ENST00000363999 107 ntBASIC0.78□□□□□ -2.28
HMGB3O15347 snoZ40.1-201ENST00000364540 72 ntBASIC0.78□□□□□ -2.28
HMGB3O15347 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
HMGB3O15347 RNU6-968P-201ENST00000384076 107 ntBASIC0.78□□□□□ -2.28
HMGB3O15347 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.78□□□□□ -2.28
HMGB3O15347 AC069282.1-201ENST00000411911 526 ntBASIC0.78□□□□□ -2.28
HMGB3O15347 RPL21P90-201ENST00000415692 466 ntBASIC0.78□□□□□ -2.28
HMGB3O15347 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.78□□□□□ -2.28
HMGB3O15347 RPS15AP10-201ENST00000432472 382 ntBASIC0.78□□□□□ -2.28
HMGB3O15347 HSPE1P9-201ENST00000440046 311 ntBASIC0.78□□□□□ -2.28
HMGB3O15347 PGBD4P5-201ENST00000445958 426 ntBASIC0.78□□□□□ -2.28
HMGB3O15347 AP000542.1-201ENST00000448473 371 ntBASIC0.78□□□□□ -2.28
HMGB3O15347 ZNF886P-201ENST00000450781 723 ntBASIC0.78□□□□□ -2.28
HMGB3O15347 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.78□□□□□ -2.28
HMGB3O15347 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.78□□□□□ -2.28
HMGB3O15347 AC114982.1-201ENST00000469402 321 ntBASIC0.78□□□□□ -2.28
HMGB3O15347 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.78□□□□□ -2.28
HMGB3O15347 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.78□□□□□ -2.28
HMGB3O15347 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.78□□□□□ -2.28
HMGB3O15347 AC009646.1-201ENST00000510455 318 ntBASIC0.78□□□□□ -2.28
HMGB3O15347 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.78□□□□□ -2.28
HMGB3O15347 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
HMGB3O15347 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.78□□□□□ -2.28
HMGB3O15347 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
HMGB3O15347 AL157871.3-201ENST00000557231 293 ntBASIC0.78□□□□□ -2.28
HMGB3O15347 AL132657.2-201ENST00000564417 358 ntBASIC0.78□□□□□ -2.28
HMGB3O15347 MIR1273C-201ENST00000578669 77 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms